Functional clusters

Information

  • Type MapMan
  • Description Redox homeostasis.tocopherol biosynthesis.phytol kinase (VTE5)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapa A03 1 CH_bra_333 2 2 0.000429314
Cicer arietinum L. Ca_LG5_v3 1 CH_car_238 2 2 0.00023349
Durio zibethinus NW_019168481.1 1 CH_dzi_338 2 2 0.000463489
Erythranthe guttata scaffold_6 1 CH_egut_378 2 2 0.000218444
Lactuca sativa Lsat_1_v8_lg_8 1 CH_lsa_464 2 2 0.000308404
Olea europaea chr10 1 CH_oeu_327 2 2 0.000320273
Populus trichocarpa Chr09 1 CH_ptr_515 2 2 0.000578001
Salvia bowleyana GWHASIU00000008 1 CH_sbo_159 4 69 0.000000243921
Vitis vinifera chr6 1 CH_vvi_358 2 2 0.000228189
Brassica rapa A03 2 CH_bra_333 2 2 0.000429314
Cicer arietinum L. Ca_LG5_v3 2 CH_car_238 2 2 0.00023349
Durio zibethinus NW_019168481.1 2 CH_dzi_338 2 2 0.000463489
Eucalyptus grandis Chr09 2 CH_egr_423 3 3 0.0000000513834
Erythranthe guttata scaffold_6 2 CH_egut_378 2 2 0.000218444
Lactuca sativa Lsat_1_v8_lg_8 2 CH_lsa_464 2 2 0.000308404
Olea europaea chr10 2 CH_oeu_327 2 2 0.000320273
Populus trichocarpa Chr09 2 CH_ptr_515 2 2 0.000578001
Salvia bowleyana GWHASIU00000008 2 CH_sbo_159 4 69 0.000000243921
Vitis vinifera chr6 2 CH_vvi_358 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001