Functional clusters

Information

  • Type MapMan
  • Description Redox homeostasis.tocopherol biosynthesis.4-hydroxyphenylpyruvate dioxygenase (HPPD)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 1 CH_acertr_353 2 2 0.000070497
Aquilegia oxysepala CHR01 1 CH_aox_180 2 2 0.0000801989
Amborella trichopoda AmTr_v1.0_scaffold00032 1 CH_atr_212 2 2 0.0000794407
Beta vulgaris Chr9_EL10_PGA_scaffold8 1 CH_bvu_198 2 2 0.0000827917
Cannabis sativa NC_044379.1 1 CH_cansat_113 3 5 0.0000000646747
Carpinus fangiana scaffold13 1 CH_cfa_250 2 2 0.0000757346
Chenopodium quinoa C_Quinoa_Scaffold_2177 1 CH_cqu_35 6 10 5.21197e-16
Chlamydomonas reinhardtii chromosome_9 1 CH_cre_36 2 2 0.000113733
Medicago truncatula chr5 1 CH_mtr_322 3 7 0.000000354454
Papaver somniferum NC_039359.1 1 CH_pso_328 3 10 0.00000319501
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_495 2 2 0.0000398653
Theobroma cacao Chromosome_1 1 CH_tca_147 3 5 0.0000000804555
Acer truncatum chr6 2 CH_acertr_353 2 2 0.000070497
Aquilegia oxysepala CHR01 2 CH_aox_180 2 2 0.0000801989
Amborella trichopoda AmTr_v1.0_scaffold00032 2 CH_atr_212 2 2 0.0000794407
Beta vulgaris Chr9_EL10_PGA_scaffold8 2 CH_bvu_198 2 2 0.0000827917
Cannabis sativa NC_044379.1 2 CH_cansat_113 3 5 0.0000000646747
Carpinus fangiana scaffold13 2 CH_cfa_250 2 2 0.0000757346
Chenopodium quinoa C_Quinoa_Scaffold_2177 2 CH_cqu_35 6 10 5.21197e-16
Chlamydomonas reinhardtii chromosome_9 2 CH_cre_36 2 2 0.000113733
Eucalyptus grandis Chr01 2 CH_egr_351 3 3 0.00000000513834
Papaver somniferum NC_039359.1 2 CH_pso_328 3 10 0.00000319501
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_495 2 2 0.0000398653
Theobroma cacao Chromosome_1 2 CH_tca_147 3 5 0.0000000804555

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001