Functional clusters

Information

  • Type MapMan
  • Description Redox homeostasis.thiol-based redox regulation.methionine sulfoxide reductase activities.methionine S-enantiomer sulfoxide reductase (MsrA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 1 CH_acertr_93 4 11 0.000000012131
Arabidopsis lyrata scaffold_6 1 CH_aly_419 2 2 0.000660044
Arabidopsis thaliana Chr5 1 CH_ath_349 2 2 0.000286492
Brassica carinata ChrB01 1 CH_bca_103 4 4 0.000000000370707
Brassica carinata ChrB01 1 CH_bca_104 4 4 0.000000000370707
Brassica napus A03 1 CH_bna_30 5 5 0.0000000000000233947
Brassica napus C03 1 CH_bna_36 5 6 0.000000000000140349
Brassica oleracea C3 1 CH_bol_37 4 4 0.0000000000220015
Brassica rapa A03 1 CH_bra_19 5 5 0.0000000000000064212
Camellia sinensis var. sinensis Chr1 1 CH_camsi_880 2 2 0.000687821
Cardamine hirsuta Chr6 1 CH_chi_367 2 2 0.000414723
Capsella rubella scaffold_6 1 CH_cru_144 3 3 0.000000160382
Eutrema salsugineum scaffold_2 1 CH_esa_327 2 2 0.000761499
Fragaria vesca Fvb5 1 CH_fve_404 2 2 0.000353461
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_554 2 3 0.000925157
Oryza sativa ssp. japonica chr04 1 CH_osa_313 2 2 0.000316874
Sequoiadendron giganteum chr2 1 CH_sgi_1113 2 2 0.000146145
Schrenkiella parvula ch6-6 1 CH_spa_294 2 2 0.00078734
Acer truncatum chr9 2 CH_acertr_93 4 11 0.000000012131
Arabidopsis lyrata scaffold_6 2 CH_aly_419 2 2 0.000660044
Arabidopsis thaliana Chr5 2 CH_ath_349 2 2 0.000286492
Brassica carinata ChrB01 2 CH_bca_103 4 4 0.000000000370707
Brassica carinata ChrB01 2 CH_bca_104 4 4 0.000000000370707
Brassica oleracea C3 2 CH_bol_37 4 4 0.0000000000220015
Brassica rapa A03 2 CH_bra_19 5 5 0.0000000000000064212
Camellia sinensis var. sinensis Chr1 2 CH_camsi_880 2 2 0.000687821
Cardamine hirsuta Chr6 2 CH_chi_367 2 2 0.000414723
Capsella rubella scaffold_6 2 CH_cru_144 3 3 0.000000160382
Eucalyptus grandis Chr10 2 CH_egr_564 3 10 0.00000431431
Eutrema salsugineum scaffold_2 2 CH_esa_327 2 2 0.000761499
Fragaria vesca Fvb5 2 CH_fve_404 2 2 0.000353461
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_554 2 3 0.000925157
Oryza sativa ssp. japonica chr04 2 CH_osa_313 2 2 0.000316874
Sequoiadendron giganteum chr2 2 CH_sgi_1113 2 2 0.000146145
Schrenkiella parvula ch6-6 2 CH_spa_294 2 2 0.00078734

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001