Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_9 1 CH_aly_121 4 4 0.000000140787
Erythranthe guttata scaffold_4 1 CH_egut_189 4 5 0.000000528716
Helianthus annuus HanXRQChr09 1 CH_han_130 6 7 0.0000000000667204
Helianthus annuus HanXRQChr02 1 CH_han_148 6 8 0.000000000266346
Helianthus annuus HanXRQChr05 1 CH_han_96 7 11 0.00000000000724898
Lupinus albus Lalb_Chr03 1 CH_lal_223 3 3 0.0000809816
Lotus japonicus Contig00319 1 CH_lja_80 5 6 0.00000000224108
Medicago truncatula chr6 1 CH_mtr_567 3 3 0.0000957671
Phaseolus vulgaris Chr11 1 CH_pvu_251 3 3 0.0000683118
Quercus lobata 8 1 CH_qlo_424 6 40 0.000000187718
Trochodendron aralioides group4 1 CH_tar_236 3 3 0.0000534188
Arabidopsis lyrata scaffold_9 2 CH_aly_121 4 4 0.000000140787
Eucalyptus grandis Chr01 2 CH_egr_654 3 3 0.0000507668
Erythranthe guttata scaffold_4 2 CH_egut_189 4 5 0.000000528716
Helianthus annuus HanXRQChr09 2 CH_han_130 6 7 0.0000000000667204
Helianthus annuus HanXRQChr02 2 CH_han_148 6 8 0.000000000266346
Helianthus annuus HanXRQChr05 2 CH_han_96 7 11 0.00000000000724898
Lupinus albus Lalb_Chr03 2 CH_lal_223 3 3 0.0000809816
Lotus japonicus Contig00319 2 CH_lja_80 5 6 0.00000000224108
Phaseolus vulgaris Chr11 2 CH_pvu_251 3 3 0.0000683118
Quercus lobata 8 2 CH_qlo_424 6 40 0.000000187718
Trochodendron aralioides group4 2 CH_tar_236 3 3 0.0000534188

Available child term results

Ontology identifier Description Number of clusters
1.1.8.1.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.membrane subcomplex M 11
1.1.8.1.1.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.membrane subcomplex M.component NdhB 2
1.1.8.1.2.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhI 2
1.1.8.1.2.5 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhL 2
1.1.8.1.2.6 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhM 6
1.1.8.1.2.7 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhN 8
1.1.8.1.2.8 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhO 4
1.1.8.1.3.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB1/NDF1 2
1.1.8.1.3.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB2/NDF2 4
1.1.8.1.3.3 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB3/NDF4 2
1.1.8.1.3.4 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB4/NDF6 7
1.1.8.1.3.5 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB5/NDH18 2
1.1.8.1.4.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.component PnsL2/PQL1 2
1.1.8.1.4.3 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.component PnsL3/PQL2 4
1.1.8.1.4.4 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.component PnsL4 2
1.1.8.1.5.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.component NdhS 4
1.1.8.1.5.3 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.component NdhU 4
1.1.8.1.5.4 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.component NdhV 4
1.1.8.1.6 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance 2
1.1.8.1.6.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.ndhA-specific mRNA splicing factor 2
1.1.8.1.6.10 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR9) 4
1.1.8.1.6.11 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (PQL3) 2
1.1.8.1.6.2.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.Cpn60 chaperonin heterodimer.subunit alpha 4
1.1.8.1.6.2.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.Cpn60 chaperonin heterodimer.subunit beta 1
1.1.8.1.6.3 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR1) 6
1.1.8.1.6.5 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR6) 4
1.1.8.1.6.6 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR7) 2
1.1.8.1.6.8 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR41) 4
1.1.8.1.6.9 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR42) 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001