Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem I

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus C09 1 CH_bna_359 4 8 0.00000891757
Nelumbo nucifera scaffold010 1 CH_nnu_244 4 12 0.0000111918
Physcomitrium patens Chr04 1 CH_ppa_119 3 3 0.000103758
Nelumbo nucifera scaffold010 2 CH_nnu_244 4 12 0.0000111918
Physcomitrium patens Chr04 2 CH_ppa_119 3 3 0.000103758

Available child term results

Ontology identifier Description Number of clusters
1.1.4.1.1 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa1 10
1.1.4.1.2 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa2 6
1.1.4.1.3 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa3 5
1.1.4.1.4 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa4 4
1.1.4.1.6 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa6 2
1.1.4.2.11 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaK 8
1.1.4.2.12 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaL 10
1.1.4.2.14 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaN 2
1.1.4.2.15 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaO 4
1.1.4.2.4 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaD 4
1.1.4.2.5 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaE 4
1.1.4.2.6 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaF 6
1.1.4.2.7 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaG 4
1.1.4.2.9 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaI 1
1.1.4.3.1 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (HCF101) 4
1.1.4.3.4 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (YCF4) 3
1.1.4.3.5 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (PYG7) 4
1.1.4.3.6 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (Y3IP1) 10
1.1.4.3.7 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (PSA2) 4
1.1.4.3.8 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (PSA3) 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001