Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.regulatory protein (DLDG1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium hirsutum A05 1 CH_ghi_474 2 2 0.0000801047
Quercus lobata 11 1 CH_qlo_632 2 2 0.0000516289
Tarenaya hassleriana NW_010971389.1 1 CH_tha_127 2 3 0.000209534
Vanilla planifolia CM028159.1 1 CH_vpl_231 2 3 0.000221656
Zea mays 1 1 CH_zma_186 2 2 0.000153394
Gossypium hirsutum A05 2 CH_ghi_474 2 2 0.0000801047
Quercus lobata 11 2 CH_qlo_632 2 2 0.0000516289
Tarenaya hassleriana NW_010971389.1 2 CH_tha_127 2 3 0.000209534
Vanilla planifolia CM028159.1 2 CH_vpl_231 2 3 0.000221656
Zea mays 1 2 CH_zma_186 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001