Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.pH-sensor protein (PsbS)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Chlamydomonas reinhardtii chromosome_1 1 CH_cre_54 2 4 0.000682322
Helianthus annuus HanXRQChr02 1 CH_han_420 2 2 0.0000386429
Chlamydomonas reinhardtii chromosome_1 2 CH_cre_54 2 4 0.000682322
Helianthus annuus HanXRQChr02 2 CH_han_420 2 2 0.0000386429

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001