Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem II.assembly.LHCII-stabilizing factor (SEP3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR03 1 CH_aox_147 2 2 0.0000801989
Amborella trichopoda AmTr_v1.0_scaffold00002 1 CH_atr_169 2 2 0.0000794407
Medicago truncatula chr4 1 CH_mtr_502 2 2 0.0000410863
Olea europaea scaffold372 1 CH_oeu_222 2 2 0.000160137
Physcomitrium patens Chr14 1 CH_ppa_209 2 2 0.000367636
Papaver somniferum NC_039364.1 1 CH_pso_474 2 2 0.00013514
Papaver somniferum NC_039365.1 1 CH_pso_475 2 2 0.00013514
Trochodendron aralioides group15 1 CH_tar_333 2 2 0.00018011
Aquilegia oxysepala CHR03 2 CH_aox_147 2 2 0.0000801989
Amborella trichopoda AmTr_v1.0_scaffold00002 2 CH_atr_169 2 2 0.0000794407
Olea europaea scaffold372 2 CH_oeu_222 2 2 0.000160137
Physcomitrium patens Chr14 2 CH_ppa_209 2 2 0.000367636
Papaver somniferum NC_039364.1 2 CH_pso_474 2 2 0.00013514
Papaver somniferum NC_039365.1 2 CH_pso_475 2 2 0.00013514
Trochodendron aralioides group15 2 CH_tar_333 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001