Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbX

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB04 1 CH_bca_389 3 8 0.00000214898
Brassica carinata ChrC07 1 CH_bca_48 4 4 0.00000000000205134
Brassica oleracea C8 1 CH_bol_267 2 2 0.0000980584
Brassica rapa A08 1 CH_bra_227 2 2 0.000128794
Chlamydomonas reinhardtii chromosome_2 1 CH_cre_55 2 4 0.000682322
Gossypium hirsutum A13 1 CH_ghi_247 3 3 0.000000128337
Gossypium hirsutum D13 1 CH_ghi_248 3 3 0.000000128337
Gossypium raimondii Chr13 1 CH_gra_121 3 3 0.0000000431127
Solanum pennellii Spenn-ch12 1 CH_spe_119 3 3 0.0000000118706
Solanum tuberosum ST4.03ch12 1 CH_stu_137 3 3 0.0000000157569
Brassica carinata ChrB04 2 CH_bca_389 3 8 0.00000214898
Brassica carinata ChrC07 2 CH_bca_48 4 4 0.00000000000205134
Brassica oleracea C8 2 CH_bol_267 2 2 0.0000980584
Brassica rapa A08 2 CH_bra_227 2 2 0.000128794
Chlamydomonas reinhardtii chromosome_2 2 CH_cre_55 2 4 0.000682322
Gossypium hirsutum A13 2 CH_ghi_247 3 3 0.000000128337
Gossypium hirsutum D13 2 CH_ghi_248 3 3 0.000000128337
Gossypium raimondii Chr13 2 CH_gra_121 3 3 0.0000000431127
Solanum pennellii Spenn-ch12 2 CH_spe_119 3 3 0.0000000118706
Solanum tuberosum ST4.03ch12 2 CH_stu_137 3 3 0.0000000157569

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001