Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC05 1 CH_bca_980 2 2 0.00059854
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_275 3 4 0.00000721107
Vanilla planifolia JADCNL010000483.1 1 CH_vpl_352 3 51 0.000680066
Zea mays 5 1 CH_zma_275 2 2 0.000766969
Brassica carinata ChrC05 2 CH_bca_980 2 2 0.00059854
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_275 3 4 0.00000721107
Vanilla planifolia JADCNL010000483.1 2 CH_vpl_352 3 51 0.000680066
Zea mays 5 2 CH_zma_275 2 2 0.000766969

Available child term results

Ontology identifier Description Number of clusters
1.1.1.2.1.2 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.component D2/PsbD 2
1.1.1.2.1.5 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.cytochrome b559 heterodimer 4
1.1.1.2.1.5.1 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.cytochrome b559 heterodimer.component alpha/PsbE 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001