Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 1 CH_aly_1 30 67 3.76965e-41
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 1 CH_amhyb_1 26 63 1.85367e-34
Arabidopsis thaliana ChrC 1 CH_ath_1 30 54 1.13704e-55
Brassica napus C09 1 CH_bna_1 21 34 7.19567e-33
Brassica napus BNapus_Darmor_BZH_scaffold_253 1 CH_bna_159 9 29 0.0000000180317
Brassica napus A06 1 CH_bna_24 11 19 0.00000000000000592721
Brassica napus C07 1 CH_bna_351 5 6 0.00000716403
Brassica napus C06 1 CH_bna_58 10 22 0.0000000000077766
Brassica oleracea Boleracea_scaffold_46 1 CH_bol_1 30 60 5.52807e-40
Brassica oleracea C2 1 CH_bol_144 11 63 0.00000124113
Brassica oleracea Boleracea_scaffold_45 1 CH_bol_15 21 79 6.41948e-20
Brassica oleracea Boleracea_scaffold_47 1 CH_bol_2 27 52 3.15408e-36
Brassica oleracea Boleracea_scaffold_37 1 CH_bol_29 12 28 0.000000000000777468
Brassica oleracea Boleracea_scaffold_35 1 CH_bol_3 28 68 5.22835e-34
Brassica oleracea Boleracea_scaffold_29 1 CH_bol_5 24 64 1.93104e-27
Brassica oleracea C9 1 CH_bol_50 10 24 0.000000000587277
Brassica oleracea Boleracea_scaffold_29 1 CH_bol_7 24 80 1.08579e-24
Brassica oleracea Boleracea_scaffold_49 1 CH_bol_9 21 68 1.78167e-21
Brassica oleracea Boleracea_scaffold_44 1 CH_bol_97 10 36 0.0000000687097
Brassica rapa Brapa_scaffold_25 1 CH_bra_1 28 77 8.1007e-32
Brassica rapa Brapa_scaffold_179 1 CH_bra_135 8 24 0.00000262464
Brassica rapa Brapa_scaffold_138 1 CH_bra_16 15 41 0.00000000000000164124
Brassica rapa Brapa_scaffold_59 1 CH_bra_2 26 78 4.00369e-28
Brassica rapa Brapa_scaffold_143 1 CH_bra_25 13 30 0.0000000000000362809
Brassica rapa Brapa_scaffold_103 1 CH_bra_3 23 56 5.19764e-27
Brassica rapa Brapa_scaffold_151 1 CH_bra_66 8 18 0.00000000505497
Brassica rapa Brapa_scaffold_58 1 CH_bra_9 14 25 1.37374e-17
Brassica rapa Brapa_scaffold_140 1 CH_bra_92 10 39 0.000000191142
Beta vulgaris Scaffold_0015 1 CH_bvu_159 6 16 0.0000786555
Capsicum annuum PGAv.1.6.scaffold129 1 CH_can_177 6 9 0.00000129704
Capsicum annuum PGAv.1.6.scaffold1045 1 CH_can_234 5 7 0.000035491
Capsicum annuum PGAv.1.6.scaffold219 1 CH_can_422 6 20 0.000548522
Cardamine hirsuta ChrC 1 CH_chi_2 30 65 4.24634e-42
Daucus carota DCARv2_PT 1 CH_dca_1 30 38 1.40646e-52
Erythranthe guttata scaffold_4 1 CH_egut_129 9 24 0.0000000168392
Gossypium hirsutum A09 1 CH_ghi_104 11 24 0.00000000000913704
Gossypium hirsutum D06 1 CH_ghi_219 6 6 0.0000000550342
Gossypium hirsutum A02 1 CH_ghi_428 6 11 0.000024411
Gossypium hirsutum D01 1 CH_ghi_73 11 17 0.0000000000000481301
Glycine max Gm12 1 CH_gma_76 8 11 0.0000000000876202
Gossypium raimondii Chr07 1 CH_gra_451 4 5 0.000947804
Helianthus annuus HanXRQChr13 1 CH_han_230 11 47 0.0000001105
Helianthus annuus HanXRQChr10 1 CH_han_277 7 12 0.000000569359
Helianthus annuus HanXRQChr11 1 CH_han_347 5 5 0.00000682554
Helianthus annuus HanXRQChr04 1 CH_han_405 6 11 0.0000316809
Helianthus annuus HanXRQChr11 1 CH_han_406 6 11 0.0000316809
Helianthus annuus HanXRQCP 1 CH_han_5 26 53 9.87592e-33
Lupinus albus Lalb_Chr23 1 CH_lal_113 5 5 0.00000129322
Lupinus albus Lalb_Chr07 1 CH_lal_21 14 42 0.0000000000000064849
Lotus japonicus Contig00318 1 CH_lja_1 26 46 2.63947e-37
Lotus japonicus Contig00489 1 CH_lja_125 8 20 0.000000128633
Lonicera japonica GWHAAZE00000002 1 CH_lonja_5 30 70 3.09122e-41
Lactuca sativa Lsat_1_v8_lg_1 1 CH_lsa_226 5 5 0.000000910461
Lactuca sativa Lsat_1_v8_lg_1 1 CH_lsa_365 4 4 0.000122572
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_514 4 5 0.000609202
Medicago truncatula chr4 1 CH_mtr_20 19 50 4.19274e-25
Nelumbo nucifera scaffold064 1 CH_nnu_54 7 9 0.00000000029126
Punica granatum NC_035240.1 1 CH_pgr_1 30 53 4.96592e-44
Physcomitrium patens Chr21 1 CH_ppa_66 5 6 0.0000199019
Papaver somniferum NC_029434.1 1 CH_pso_1 30 53 1.79111e-49
Populus trichocarpa Chr13 1 CH_ptr_11 23 37 2.01547e-33
Populus trichocarpa Chr16 1 CH_ptr_409 4 4 0.000264375
Populus trichocarpa Chr11 1 CH_ptr_62 10 14 0.000000000000155808
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_173 6 6 0.000000000796301
Rosa chinensis RcHm_v2.0_CP 1 CH_rch_9 25 78 8.18747e-34
Salvia bowleyana GWHASIU00000001 1 CH_sbo_6 20 49 5.42393e-30
Salix brachista GWHAAZH00000021 1 CH_sbr_43 12 40 0.00000000000701632
Sechium edule Contig00347 1 CH_sed_28 12 29 0.00000000000136647
Sechium edule LG13 1 CH_sed_5 25 80 4.18446e-26
Sechium edule Contig00297 1 CH_sed_9 22 76 9.94431e-22
Solanum lycopersicum SL4.0ch00 1 CH_sly_12 23 70 3.65859e-26
Solanum lycopersicum SL4.0ch00 1 CH_sly_71 10 19 0.00000000000467946
Solanum lycopersicum SL4.0ch00 1 CH_sly_78 10 20 0.00000000000928923
Selaginella moellendorffii scaffold_175 1 CH_smo_1 28 52 5.55683e-41
Selenicereus undatus Scaffold_33673 1 CH_sun_10 9 14 0.000000000067642
Selenicereus undatus Scaffold_33675 1 CH_sun_101 5 7 0.0000676372
Selenicereus undatus Scaffold_3410 1 CH_sun_225 5 9 0.000398896
Selenicereus undatus Scaffold_19641 1 CH_sun_45 7 12 0.000000259627
Selenicereus undatus Scaffold_33676 1 CH_sun_71 7 16 0.00000361795
Selenicereus undatus Scaffold_33676 1 CH_sun_74 7 17 0.00000609559
Selenicereus undatus Scaffold_19641 1 CH_sun_98 6 13 0.0000541676
Vaccinium macrocarpon scaffold00362_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_24 13 30 0.00000000000000123657
Arabidopsis lyrata scaffold_2 2 CH_aly_1 30 67 3.76965e-41
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 2 CH_amhyb_1 26 63 1.85367e-34
Arabidopsis thaliana ChrC 2 CH_ath_1 30 54 1.13704e-55
Brassica oleracea Boleracea_scaffold_46 2 CH_bol_1 30 60 5.52807e-40
Brassica oleracea C2 2 CH_bol_144 11 63 0.00000124113
Brassica oleracea Boleracea_scaffold_45 2 CH_bol_15 21 79 6.41948e-20
Brassica oleracea Boleracea_scaffold_47 2 CH_bol_2 27 52 3.15408e-36
Brassica oleracea Boleracea_scaffold_37 2 CH_bol_29 12 28 0.000000000000777468
Brassica oleracea Boleracea_scaffold_35 2 CH_bol_3 28 68 5.22835e-34
Brassica oleracea Boleracea_scaffold_29 2 CH_bol_5 24 64 1.93104e-27
Brassica oleracea C9 2 CH_bol_50 10 24 0.000000000587277
Brassica oleracea Boleracea_scaffold_29 2 CH_bol_7 24 80 1.08579e-24
Brassica oleracea Boleracea_scaffold_49 2 CH_bol_9 21 68 1.78167e-21
Brassica oleracea Boleracea_scaffold_44 2 CH_bol_97 10 36 0.0000000687097
Brassica rapa Brapa_scaffold_25 2 CH_bra_1 28 77 8.1007e-32
Brassica rapa Brapa_scaffold_179 2 CH_bra_135 8 24 0.00000262464
Brassica rapa Brapa_scaffold_138 2 CH_bra_16 15 41 0.00000000000000164124
Brassica rapa Brapa_scaffold_59 2 CH_bra_2 26 78 4.00369e-28
Brassica rapa Brapa_scaffold_143 2 CH_bra_25 13 30 0.0000000000000362809
Brassica rapa Brapa_scaffold_103 2 CH_bra_3 23 56 5.19764e-27
Brassica rapa Brapa_scaffold_151 2 CH_bra_66 8 18 0.00000000505497
Brassica rapa Brapa_scaffold_58 2 CH_bra_9 14 25 1.37374e-17
Brassica rapa Brapa_scaffold_140 2 CH_bra_92 10 39 0.000000191142
Beta vulgaris Scaffold_0015 2 CH_bvu_159 6 16 0.0000786555
Capsicum annuum PGAv.1.6.scaffold129 2 CH_can_177 6 9 0.00000129704
Capsicum annuum PGAv.1.6.scaffold1045 2 CH_can_234 5 7 0.000035491
Capsicum annuum PGAv.1.6.scaffold219 2 CH_can_422 6 20 0.000548522
Cardamine hirsuta ChrC 2 CH_chi_2 30 65 4.24634e-42
Daucus carota DCARv2_PT 2 CH_dca_1 30 38 1.40646e-52
Erythranthe guttata scaffold_4 2 CH_egut_129 9 24 0.0000000168392
Gossypium hirsutum A09 2 CH_ghi_104 11 24 0.00000000000913704
Gossypium hirsutum D06 2 CH_ghi_219 6 6 0.0000000550342
Gossypium hirsutum A02 2 CH_ghi_428 6 11 0.000024411
Gossypium hirsutum D01 2 CH_ghi_73 11 17 0.0000000000000481301
Glycine max Gm12 2 CH_gma_76 8 11 0.0000000000876202
Gossypium raimondii Chr07 2 CH_gra_451 4 5 0.000947804
Helianthus annuus HanXRQChr13 2 CH_han_230 11 47 0.0000001105
Helianthus annuus HanXRQChr10 2 CH_han_277 7 12 0.000000569359
Helianthus annuus HanXRQChr11 2 CH_han_347 5 5 0.00000682554
Helianthus annuus HanXRQChr04 2 CH_han_405 6 11 0.0000316809
Helianthus annuus HanXRQChr11 2 CH_han_406 6 11 0.0000316809
Helianthus annuus HanXRQCP 2 CH_han_5 26 53 9.87592e-33
Lupinus albus Lalb_Chr23 2 CH_lal_113 5 5 0.00000129322
Lupinus albus Lalb_Chr07 2 CH_lal_21 14 42 0.0000000000000064849
Lotus japonicus Contig00318 2 CH_lja_1 26 46 2.63947e-37
Lotus japonicus Contig00489 2 CH_lja_125 8 20 0.000000128633
Lonicera japonica GWHAAZE00000002 2 CH_lonja_5 30 70 3.09122e-41
Lactuca sativa Lsat_1_v8_lg_1 2 CH_lsa_226 5 5 0.000000910461
Lactuca sativa Lsat_1_v8_lg_1 2 CH_lsa_365 4 4 0.000122572
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_514 4 5 0.000609202
Nelumbo nucifera scaffold064 2 CH_nnu_54 7 9 0.00000000029126
Punica granatum NC_035240.1 2 CH_pgr_1 30 53 4.96592e-44
Physcomitrium patens Chr21 2 CH_ppa_66 5 6 0.0000199019
Papaver somniferum NC_029434.1 2 CH_pso_1 30 53 1.79111e-49
Populus trichocarpa Chr13 2 CH_ptr_11 23 37 2.01547e-33
Populus trichocarpa Chr16 2 CH_ptr_409 4 4 0.000264375
Populus trichocarpa Chr11 2 CH_ptr_62 10 14 0.000000000000155808
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_173 6 6 0.000000000796301
Rosa chinensis RcHm_v2.0_CP 2 CH_rch_9 25 78 8.18747e-34
Salvia bowleyana GWHASIU00000001 2 CH_sbo_6 20 49 5.42393e-30
Salix brachista GWHAAZH00000021 2 CH_sbr_43 12 40 0.00000000000701632
Sechium edule Contig00347 2 CH_sed_28 12 29 0.00000000000136647
Sechium edule LG13 2 CH_sed_5 25 80 4.18446e-26
Sechium edule Contig00297 2 CH_sed_9 22 76 9.94431e-22
Solanum lycopersicum SL4.0ch00 2 CH_sly_12 23 70 3.65859e-26
Solanum lycopersicum SL4.0ch00 2 CH_sly_71 10 19 0.00000000000467946
Solanum lycopersicum SL4.0ch00 2 CH_sly_78 10 20 0.00000000000928923
Selaginella moellendorffii scaffold_175 2 CH_smo_1 28 52 5.55683e-41
Selenicereus undatus Scaffold_33673 2 CH_sun_10 9 14 0.000000000067642
Selenicereus undatus Scaffold_33675 2 CH_sun_101 5 7 0.0000676372
Selenicereus undatus Scaffold_3410 2 CH_sun_225 5 9 0.000398896
Selenicereus undatus Scaffold_19641 2 CH_sun_45 7 12 0.000000259627
Selenicereus undatus Scaffold_33676 2 CH_sun_71 7 16 0.00000361795
Selenicereus undatus Scaffold_33676 2 CH_sun_74 7 17 0.00000609559
Selenicereus undatus Scaffold_19641 2 CH_sun_98 6 13 0.0000541676
Vaccinium macrocarpon scaffold00362_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_24 13 30 0.00000000000000123657

Available child term results

Ontology identifier Description Number of clusters
1.1.1.1.1 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb1/2/3 147
1.1.1.1.2 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb4 8
1.1.1.1.3 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb5 6
1.1.1.1.4 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb6 14
1.1.1.2 Photosynthesis.photophosphorylation.photosystem II.PS-II complex 3
1.1.1.2.1 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex 8
1.1.1.2.1.2 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.component D2/PsbD 2
1.1.1.2.1.5 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.cytochrome b559 heterodimer 4
1.1.1.2.1.5.1 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.cytochrome b559 heterodimer.component alpha/PsbE 4
1.1.1.2.10 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbTn 15
1.1.1.2.11 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbW 18
1.1.1.2.12 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbX 20
1.1.1.2.13 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbY 1
1.1.1.2.2.1 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic components.component OEC33/PsbO 4
1.1.1.2.2.2 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic components.component OEC23/PsbP 12
1.1.1.2.2.3 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic components.component OEC16/PsbQ 4
1.1.1.2.5 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbK 2
1.1.1.2.7 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbM 2
1.1.1.2.8 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbR 12
1.1.1.3 Photosynthesis.photophosphorylation.photosystem II.assembly 2
1.1.1.3.1 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (LPA1) 2
1.1.1.3.10 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (Psb29) 8
1.1.1.3.12 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (Psb32) 4
1.1.1.3.13 Photosynthesis.photophosphorylation.photosystem II.assembly.stabilizing factor (Psb33) 2
1.1.1.3.14 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (PAM68) 9
1.1.1.3.15 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (RBD1) 4
1.1.1.3.16 Photosynthesis.photophosphorylation.photosystem II.assembly.chaperone-like assembly factor (SCO2/CYO1) 8
1.1.1.3.17 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (TerC) 10
1.1.1.3.18 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (LTO1) 9
1.1.1.3.19 Photosynthesis.photophosphorylation.photosystem II.assembly.psbA-translation activator (HCF173) 2
1.1.1.3.2 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (LPA2) 4
1.1.1.3.20 Photosynthesis.photophosphorylation.photosystem II.assembly.psbJ/psbN-translation activator (LPE1) 4
1.1.1.3.22 Photosynthesis.photophosphorylation.photosystem II.assembly.thioredoxin (TRX-M) 7
1.1.1.3.23 Photosynthesis.photophosphorylation.photosystem II.assembly.LHCII-stabilizing factor (SEP3) 15
1.1.1.3.24 Photosynthesis.photophosphorylation.photosystem II.assembly.membrane fusion protein (VIPP) 2
1.1.1.3.25 Photosynthesis.photophosphorylation.photosystem II.assembly.thylakoid biogenesis factor (CPSFL1) 11
1.1.1.3.3 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (LPA3) 8
1.1.1.3.4 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (HCF106) 2
1.1.1.3.5 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (HCF136) 4
1.1.1.3.7.1 Photosynthesis.photophosphorylation.photosystem II.assembly.HCF244-OHP assembly factor complex.scaffold component HCF244 6
1.1.1.3.7.2 Photosynthesis.photophosphorylation.photosystem II.assembly.HCF244-OHP assembly factor complex.component OHP1 2
1.1.1.3.9 Photosynthesis.photophosphorylation.photosystem II.assembly.regulatory protein (Psb28) 2
1.1.1.4.1 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.protease (FtsH1/5) 2
1.1.1.4.2 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.protease (FtsH2/8) 2
1.1.1.4.3 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.stabilizing factor (ELIP) 112
1.1.1.4.4 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.repair factor (PPL1) 2
1.1.1.4.5 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.photoprotective factor (MPH1) 8
1.1.1.4.7 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.assembly factor (MET1) 2
1.1.1.4.8 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.assembly factor (CYP38) 2
1.1.1.4.9 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.assembly factor (LQY1) 2
1.1.1.5.1.1 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.regulatory phosphorylation.protein kinase (STN7) 2
1.1.1.5.1.3 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.regulatory phosphorylation.phosphatase (PPH1/TAP38) 2
1.1.1.5.1.4 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.regulatory phosphorylation.phosphatase (PBCP) 2
1.1.1.5.2.1 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.regulatory acetylation.lysine acetyltransferase (NSI) 2
1.1.1.5.3.1.1 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.pH-sensor protein (PsbS) 4
1.1.1.5.3.1.2 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.xanthophyll cycle 2
1.1.1.5.3.1.2.1 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.xanthophyll cycle.violaxanthin de-epoxidase (VDE) 6
1.1.1.5.3.1.2.2 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.xanthophyll cycle.zeaxanthin epoxidase (ZEP) 13
1.1.1.5.3.1.3.1 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.LhcSR-dependent machinery.light stress-responsive protein (LhcSR) 2
1.1.1.5.3.1.4 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.regulatory protein (FLAP1) 41
1.1.1.5.3.1.5 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.regulatory protein (DLDG1) 10
1.1.1.5.3.2.1 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qH-type antenna quenching.NPQ-regulatory lipocalin (LCNP) 2
1.1.1.5.3.2.2 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qH-type antenna quenching.NPQ-regulatory protein (SOQ1) 2
1.1.1.5.3.2.3 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qH-type antenna quenching.NPQ-regulatory protein (ROQH1) 6
1.1.1.5.4.1 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.thylakoid grana stacking.regulatory factor (RIQ) 6
1.1.1.5.4.2 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.thylakoid grana stacking.regulatory factor (CURT) 8
1.1.1.5.5.1 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.acclimation factor activities.acclimation factor (MPH2) 2
1.1.1.5.5.2 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.acclimation factor activities.acclimation factor (APE) 10
1.1.1.5.5.3 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.acclimation factor activities.light-responsive regulatory protein (SEP) 6
1.1.2.2 Photosynthesis.photophosphorylation.cytochrome b6/f complex.apocytochrome b component PetB 2
1.1.2.3 Photosynthesis.photophosphorylation.cytochrome b6/f complex.Rieske iron-sulfur component PetC 6
1.1.2.7 Photosynthesis.photophosphorylation.cytochrome b6/f complex.component PetM/VII 4
1.1.2.9.1.1 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).assembly factor (CCB1) 6
1.1.2.9.1.2 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).assembly factor (CCB2) 10
1.1.2.9.1.3 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).assembly factor (CCB3) 2
1.1.2.9.1.4 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).assembly factor (CCB4) 6
1.1.2.9.2.1 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).assembly factor (CcsA) 4
1.1.2.9.2.2 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).assembly factor (Ccs1/CcsB) 8
1.1.2.9.2.3 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).assembly factor (Ccs5/CcdA) 2
1.1.2.9.4 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.assembly factor (HCF222) 4
1.1.2.9.5 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.assembly factor (HCF164) 5
1.1.3.1 Photosynthesis.photophosphorylation.Cytb6/f to PS-I electron carriers.plastocyanin copper-protein (PetE) 6
1.1.3.2 Photosynthesis.photophosphorylation.Cytb6/f to PS-I electron carriers.cytochrome hemoprotein (Cytc6a) 4
1.1.4 Photosynthesis.photophosphorylation.photosystem I 5
1.1.4.1.1 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa1 10
1.1.4.1.2 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa2 6
1.1.4.1.3 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa3 5
1.1.4.1.4 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa4 4
1.1.4.1.6 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa6 2
1.1.4.2.11 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaK 8
1.1.4.2.12 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaL 10
1.1.4.2.14 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaN 2
1.1.4.2.15 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaO 4
1.1.4.2.4 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaD 4
1.1.4.2.5 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaE 4
1.1.4.2.6 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaF 6
1.1.4.2.7 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaG 4
1.1.4.2.9 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaI 1
1.1.4.3.1 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (HCF101) 4
1.1.4.3.4 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (YCF4) 3
1.1.4.3.5 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (PYG7) 4
1.1.4.3.6 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (Y3IP1) 10
1.1.4.3.7 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (PSA2) 4
1.1.4.3.8 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (PSA3) 4
1.1.5.1.1 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin electron carrier activities.NADP-reduction-targeted ferredoxin (Fd) 44
1.1.5.1.2 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin electron carrier activities.non-NADP-reduction-targeted ferredoxin (FdC) 2
1.1.5.2.1 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase 2
1.1.5.2.3 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR-regulatory protein (LIR1) 4
1.1.6.1.1 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5-PGRL1 complex.component PGR5 2
1.1.6.1.2 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5-PGRL1 complex.component PGRL1 3
1.1.7.1.1 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein heterodimer.component FLVa 2
1.1.7.1.2 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein heterodimer.component FLVb 2
1.1.8.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex 22
1.1.8.1.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.membrane subcomplex M 11
1.1.8.1.1.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.membrane subcomplex M.component NdhB 2
1.1.8.1.2.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhI 2
1.1.8.1.2.5 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhL 2
1.1.8.1.2.6 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhM 6
1.1.8.1.2.7 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhN 8
1.1.8.1.2.8 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.component NdhO 4
1.1.8.1.3.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB1/NDF1 2
1.1.8.1.3.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB2/NDF2 4
1.1.8.1.3.3 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB3/NDF4 2
1.1.8.1.3.4 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB4/NDF6 7
1.1.8.1.3.5 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.component PnsB5/NDH18 2
1.1.8.1.4.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.component PnsL2/PQL1 2
1.1.8.1.4.3 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.component PnsL3/PQL2 4
1.1.8.1.4.4 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.component PnsL4 2
1.1.8.1.5.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.component NdhS 4
1.1.8.1.5.3 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.component NdhU 4
1.1.8.1.5.4 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.component NdhV 4
1.1.8.1.6 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance 2
1.1.8.1.6.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.ndhA-specific mRNA splicing factor 2
1.1.8.1.6.10 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR9) 4
1.1.8.1.6.11 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (PQL3) 2
1.1.8.1.6.2.1 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.Cpn60 chaperonin heterodimer.subunit alpha 4
1.1.8.1.6.2.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.Cpn60 chaperonin heterodimer.subunit beta 1
1.1.8.1.6.3 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR1) 6
1.1.8.1.6.5 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR6) 4
1.1.8.1.6.6 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR7) 2
1.1.8.1.6.8 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR41) 4
1.1.8.1.6.9 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.assembly factor (CRR42) 4
1.1.8.2 Photosynthesis.photophosphorylation.chlororespiration.non-heme diiron quinol oxidase (PTOX) 11
1.1.9 Photosynthesis.photophosphorylation.ATP synthase complex 6
1.1.9.1 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex 11
1.1.9.1.3 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit b_ 6
1.1.9.1.4 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit c 2
1.1.9.2.4 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit delta 2
1.1.9.3.1 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.assembly factor (CGL160) 4
1.1.9.3.2 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.assembly factor (BFA1) 10
1.1.9.3.3 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.assembly factor (BFA3) 14

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001