Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG9G2430 Aethionema arabicum
Ah.14g089400 Amaranthus hybridus
AL7G40980 Arabidopsis lyrata
Aqoxy7G02632 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea
AT4G14870 Arabidopsis thaliana
ATR0626G045 Amborella trichopoda
Atru.chr4.2458 Acer truncatum
AUR62033636 Chenopodium quinoa
AUR62034746 Chenopodium quinoa
BcaC09g50166 Brassica carinata
BcaNung00324 Brassica carinata
BolC1t02755H Brassica oleracea
BraA01t02180Z Brassica rapa
C01p28260 Brassica napus
CAN.G490.15 Capsicum annuum
CANSAT78G0262 Cannabis sativa
CARHR221470 Cardamine hirsuta
Carub.0007s2724 Capsella rubella
Ca_04746_v3 Cicer arietinum L.
CBR_g18894 Chara braunii
Cc03_g03840 Coffea canephora
CDE04G2079 Ceratophyllum demersum
CDE07G0184 Ceratophyllum demersum
Cfa015652 Carpinus fangiana
Ciclev10006055m.g Citrus clementina
CiPaw.01G166700 Carya illinoinensis
COL.COLO4_21483 Corchorus olitorius
Cpa.g.sc9.287 Carica papaya
CsaV3_3G013300 Cucumis sativus L.
CSS0011351 Camellia sinensis var. sinensis
DCAR_002385 Daucus carota
Duzib151G0901 Durio zibethinus
Duzib212G0056 Durio zibethinus
ECA247G1832 Erigeron canadensis
EL10Ac3g06446 Beta vulgaris
Eucgr.B01085 Eucalyptus grandis
Eucgr.L01274 Eucalyptus grandis
Eucgr.L02493 Eucalyptus grandis
FAN04G2988 Fragaria x ananassa
FAN13G1551 Fragaria x ananassa
FAN18G2754 Fragaria x ananassa
FvH4_5g07900 Fragaria vesca
Glyma.01G237800 Glycine max
Gohir.A09G216200 Gossypium hirsutum
Gohir.D09G218600 Gossypium hirsutum
Gorai.006G239600 Gossypium raimondii
HanXRQChr08g0229221 Helianthus annuus
Haze_00892 Corylus avellana
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla
HPP92_010419 Vanilla planifolia
Lalb_Chr05g0211001 Lupinus albus
Lj3P734T17 Lonicera japonica
LjContig00408g0025154 Lotus japonicus
Lsat_1_v5_gn_9_18440 Lactuca sativa
Manes.03G178200 Manihot esculenta
Mapoly0070s0085 Marchantia polymorpha
MBI16_g00841_MAGBIO Magnolia biondii
MCO02G394 Micromonas commoda
MD13G1193800 Malus domestica
MD16G1194500 Malus domestica
Medtr5g038520 Medicago truncatula
MELO3C006532.2 Cucumis melo
Migut.G00341 Erythranthe guttata
MSTRG.24738 Avicennia marina
Nitab4.5_0000043g0080 Nicotiana tabacum
Nitab4.5_0004258g0010 Nicotiana tabacum
Nn4g26476 Nelumbo nucifera
Oeu031224.1 Olea europaea
Oeu031227.1 Olea europaea
Oeu031228.1 Olea europaea
Os04g0306750 Oryza sativa ssp. japonica
Os08g0399050 Oryza sativa ssp. japonica
PGR142G3696 Punica granatum
PGSC0003DMG400032277 Solanum tuberosum
Phvul.002G045100 Phaseolus vulgaris
Potri.008G153400 Populus trichocarpa
Pp3c2_27330 Physcomitrium patens
Prupe.1G014400 Prunus persica
Psat2g124560 Pisum sativum
PSO017G2433 Papaver somniferum
PSO170G1990 Papaver somniferum
QL06p002223 Quercus lobata
RcHm_v2.0_Chr7g0190521 Rosa chinensis
Rhsim04G0201800 Rhododendron simsii
Sabra08G0117000 Salix brachista
SalBow3G4464 Salvia bowleyana
Sc13g0004450 Simmondsia chinensis
Sed0000110 Sechium edule
Sed0025719 Sechium edule
SEGI_06187 Sequoiadendron giganteum
SGA_v2.0_scaffold39G15229 Striga asiatica
Sopen09g030940 Solanum pennellii
Sp7g13010 Schrenkiella parvula
TAR636G0596 Trochodendron aralioides
TAR636G0682 Trochodendron aralioides
THA.LOC104803027 Tarenaya hassleriana
THA.LOC104822268 Tarenaya hassleriana
Thecc.04G232500 Theobroma cacao
Thhalv10026366m.g Eutrema salsugineum
unitig_32.g10818 Utricularia gibba
VMungo1215G1239 Vigna mungo
Zm00001eb375110 Zea mays

User provided reference genes

Program Settings