Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p01820 Brassica napus
Aa31sc424G30 Aethionema arabicum
Actinidia23382 Actinidia chinensis
Actinidia30030 Actinidia chinensis
AL9U11380 Arabidopsis lyrata
Aqoxy2G03928 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1E12MN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZSL8AZ Arachis hypogaea
AT4G13020 Arabidopsis thaliana
ATR0561G229 Amborella trichopoda
Atru.chr6.1448 Acer truncatum
AUR62001150 Chenopodium quinoa
AUR62016526 Chenopodium quinoa
BcaB03g16672 Brassica carinata
BcaC06g36475 Brassica carinata
BolC7t40782H Brassica oleracea
BraA07t27982Z Brassica rapa
C07p03890 Brassica napus
CAN.G874.16 Capsicum annuum
CANSAT01G0825 Cannabis sativa
CANSAT01G2624 Cannabis sativa
CARHR218320 Cardamine hirsuta
Ca_23213_v3 Cicer arietinum L.
Cc01_g16490 Coffea canephora
CDE05G0487 Ceratophyllum demersum
Ciclev10023852m.g Citrus clementina
CiPaw.13G050200 Carya illinoinensis
COL.COLO4_16114 Corchorus olitorius
Cpa.g.sc8.120 Carica papaya
CSS0037540 Camellia sinensis var. sinensis
Dinv19150 Davidia involucrata
Dinv28840 Davidia involucrata
Duzib133G1435 Durio zibethinus
Duzib138G1752 Durio zibethinus
ECA236G4462 Erigeron canadensis
EL10Ac5g11656 Beta vulgaris
EL10Ac7g17936 Beta vulgaris
EL10Ac8g19567 Beta vulgaris
Eucgr.K02126 Eucalyptus grandis
FAN27G0238 Fragaria x ananassa
FvH4_2g18351 Fragaria vesca
Glyma.03G085700 Glycine max
Glyma.16G088700 Glycine max
Gohir.A07G198500 Gossypium hirsutum
Gohir.A11G140400 Gossypium hirsutum
Gohir.D07G204900 Gossypium hirsutum
Gohir.D11G146900 Gossypium hirsutum
Gorai.001G230900 Gossypium raimondii
Gorai.007G157300 Gossypium raimondii
GSVIVG01005924001 Vitis vinifera
HanXRQChr04g0108301 Helianthus annuus
Haze_03355 Corylus avellana
Hma1.2p1_0226F.1_g095230 Hydrangea macrophylla
HPP92_013632 Vanilla planifolia
HPP92_013634 Vanilla planifolia
Hund05588 Selenicereus undatus
Hund18454 Selenicereus undatus
Lalb_Chr13g0291071 Lupinus albus
Lj1A90T43 Lonicera japonica
Lj3g0005590 Lotus japonicus
Lsat_1_v5_gn_8_89101 Lactuca sativa
Manes.12G049600 Manihot esculenta
MBI07_g38934_MAGBIO Magnolia biondii
MD05G1169100 Malus domestica
MD10G1157400 Malus domestica
Medtr8g012450 Medicago truncatula
Migut.D02516 Erythranthe guttata
Migut.O00880 Erythranthe guttata
MSTRG.18826 Avicennia marina
Nitab4.5_0000403g0110 Nicotiana tabacum
Nitab4.5_0002671g0050 Nicotiana tabacum
Nitab4.5_0003020g0180 Nicotiana tabacum
Nitab4.5_0012974g0010 Nicotiana tabacum
Nn1g08191 Nelumbo nucifera
Oeu030275.1 Olea europaea
Os03g0847600 Oryza sativa ssp. japonica
Peaxi162Scf01312g00070 Petunia axillaris
PGR044G1955 Punica granatum
PGSC0003DMG400020173 Solanum tuberosum
Phvul.010G023600 Phaseolus vulgaris
Potri.002G247500 Populus trichocarpa
Prupe.8G196200 Prunus persica
Psat4g204520 Pisum sativum
PSO017G1616 Papaver somniferum
PSO063G3659 Papaver somniferum
QL09p049880 Quercus lobata
RcHm_v2.0_Chr6g0283731 Rosa chinensis
Sabra02G0188400 Salix brachista
SalBow6G2703 Salvia bowleyana
SalBow6G3410 Salvia bowleyana
Sc17g0001950 Simmondsia chinensis
Solyc06g083210.3 Solanum lycopersicum
Sopen06g034600 Solanum pennellii
Sp3g32320 Schrenkiella parvula
TAR636G3692 Trochodendron aralioides
THA.LOC104804635 Tarenaya hassleriana
THA.LOC104808801 Tarenaya hassleriana
Thecc.01G216400 Theobroma cacao
TPR.G16715 Trifolium pratense
TWI36G1116 Tripterygium wilfordii
TWI75G1321 Tripterygium wilfordii
unitig_46.g18243 Utricularia gibba
vmacro02794 Vaccinium macrocarpon
VMungo0331G2061 Vigna mungo
Zm00001eb064400 Zea mays

User provided reference genes

Program Settings