Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09870 Brassica napus
A10p12390 Brassica napus
Aa31LG3G11120 Aethionema arabicum
Ah.15g092770 Amaranthus hybridus
AL8G30630 Arabidopsis lyrata
Aqoxy1G03004 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.902QMU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E6QS8A Arachis hypogaea
AT5G55125 Arabidopsis thaliana
ATR0317G094 Amborella trichopoda
Atru.chr2.3503 Acer truncatum
AUR62008759 Chenopodium quinoa
AUR62025479 Chenopodium quinoa
BcaB05g22183 Brassica carinata
BcaB08g35876 Brassica carinata
BcaC03g14263 Brassica carinata
BcaC04g20268 Brassica carinata
BolC2t07742H Brassica oleracea
BolC9t57437H Brassica oleracea
BraA02t06051Z Brassica rapa
BraA10t43334Z Brassica rapa
C02p16400 Brassica napus
C09p45870 Brassica napus
CANSAT11G2294 Cannabis sativa
CARHR268480 Cardamine hirsuta
Carub.0008s1542 Capsella rubella
Ca_00376_v3 Cicer arietinum L.
Ca_00400_v3 Cicer arietinum L.
Cc05_g14150 Coffea canephora
Cfa020296 Carpinus fangiana
Ciclev10009664m.g Citrus clementina
Ciclev10010691m.g Citrus clementina
CiPaw.11G193400 Carya illinoinensis
CiPaw.12G132500 Carya illinoinensis
Cpa.g.sc12.260 Carica papaya
CsaV3_2G002880 Cucumis sativus L.
CSS0008346 Camellia sinensis var. sinensis
CSS0011277 Camellia sinensis var. sinensis
CSS0015017 Camellia sinensis var. sinensis
CSS0017817 Camellia sinensis var. sinensis
DCAR_009645 Daucus carota
Duzib170G0848 Durio zibethinus
Duzib213G1022 Durio zibethinus
ECA246G4235 Erigeron canadensis
EL10Ac7g17641 Beta vulgaris
Eucgr.F00713 Eucalyptus grandis
FAN02G4031 Fragaria x ananassa
FAN05G4905 Fragaria x ananassa
FAN11G2242 Fragaria x ananassa
FAN16G3348 Fragaria x ananassa
FAN21G2784 Fragaria x ananassa
FAN25G2055 Fragaria x ananassa
FvH4_3g23350 Fragaria vesca
FvH4_6g31480 Fragaria vesca
Glyma.10G051000 Glycine max
Glyma.10G069200 Glycine max
Glyma.13G138500 Glycine max
Glyma.13G152338 Glycine max
Gohir.1Z049637 Gossypium hirsutum
Gohir.D05G373400 Gossypium hirsutum
Gorai.009G442100 Gossypium raimondii
HanXRQChr08g0233551 Helianthus annuus
Haze_09723 Corylus avellana
Hma1.2p1_0036F.1_g023250 Hydrangea macrophylla
Hma1.2p1_1332F.1_g276070 Hydrangea macrophylla
HPP92_015305 Vanilla planifolia
Lalb_Chr15g0089611 Lupinus albus
Lalb_Chr18g0059321 Lupinus albus
Lj6g0008322 Lotus japonicus
Lsat_1_v5_gn_5_3160 Lactuca sativa
Manes.12G070300 Manihot esculenta
Mapoly0141s0007 Marchantia polymorpha
MBI08_g04916_MAGBIO Magnolia biondii
MBI15_g24201_MAGBIO Magnolia biondii
MD03G1195200 Malus domestica
MD11G1211600 Malus domestica
Medtr2g014910 Medicago truncatula
Medtr2g014940 Medicago truncatula
MELO3C004505.2 Cucumis melo
Migut.H01802 Erythranthe guttata
Nitab4.5_0000755g0100 Nicotiana tabacum
Nitab4.5_0010969g0020 Nicotiana tabacum
Nn1g07252 Nelumbo nucifera
Oeu013124.1 Olea europaea
Os11g0516100 Oryza sativa ssp. japonica
Peaxi162Scf00040g00004 Petunia axillaris
PGR004G2244 Punica granatum
PGSC0003DMG400026339 Solanum tuberosum
Phvul.006G180400 Phaseolus vulgaris
Potri.001G314100 Populus trichocarpa
Prupe.4G220900 Prunus persica
Psat0s3039g0080 Pisum sativum
Psat1g201480 Pisum sativum
PSO675G6679 Papaver somniferum
QL08p007019 Quercus lobata
RcHm_v2.0_Chr5g0041121 Rosa chinensis
Sabra16G0198600 Salix brachista
Sc12g0005860 Simmondsia chinensis
Sed0025305 Sechium edule
SGA_v2.0_scaffold120G32846 Striga asiatica
SGA_v2.0_scaffold363G49951 Striga asiatica
SHI10538 Sapria himalayana
Solyc11g068490.1 Solanum lycopersicum
Sopen11g027200 Solanum pennellii
Sp6g17060 Schrenkiella parvula
THA.LOC104811625 Tarenaya hassleriana
Thecc.07G030700 Theobroma cacao
Thhalv10015372m.g Eutrema salsugineum
TWI39G0219 Tripterygium wilfordii
unitig_0.g1624 Utricularia gibba
vmacro13375 Vaccinium macrocarpon

User provided reference genes

Program Settings