Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28170 Brassica napus
Aa31LG9G2970 Aethionema arabicum
Actinidia19766 Actinidia chinensis
Actinidia35539 Actinidia chinensis
Ah.04g161230 Amaranthus hybridus
AL6G45200 Arabidopsis lyrata
Aqoxy2G02858 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4N6YKT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A0V37P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FXRR0Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LM15HT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WTC9PY Arachis hypogaea
AT4G11060 Arabidopsis thaliana
ATR0743G103 Amborella trichopoda
Atru.chr2.119 Acer truncatum
AUR62000718 Chenopodium quinoa
AUR62005246 Chenopodium quinoa
BcaB01g02721 Brassica carinata
BcaC04g21099 Brassica carinata
BolC9t56406H Brassica oleracea
BraA09t38380Z Brassica rapa
C09p35700 Brassica napus
CAN.G1273.25 Capsicum annuum
CARHR255550 Cardamine hirsuta
Carub.0006s2983 Capsella rubella
Cc02_g34550 Coffea canephora
CDE02G3361 Ceratophyllum demersum
CDE08G0605 Ceratophyllum demersum
Ciclev10002449m.g Citrus clementina
CiPaw.07G025600 Carya illinoinensis
CiPaw.08G158500 Carya illinoinensis
ClCG03G017590 Citrullus lanatus
COL.COLO4_03802 Corchorus olitorius
Cpa.g.sc48.128 Carica papaya
CsaV3_1G038450 Cucumis sativus L.
DCAR_003378 Daucus carota
DCAR_022131 Daucus carota
Dinv05263 Davidia involucrata
Dinv30851 Davidia involucrata
Duzib128G0923 Durio zibethinus
ECA246G0848 Erigeron canadensis
EL10Ac4g09868 Beta vulgaris
Eucgr.H03273 Eucalyptus grandis
FAN05G3849 Fragaria x ananassa
FAN09G2269 Fragaria x ananassa
FvH4_4g00740 Fragaria vesca
FvH4_6g07030 Fragaria vesca
Glyma.10G149700 Glycine max
Glyma.20G238600 Glycine max
Gohir.A08G207500 Gossypium hirsutum
Gohir.D08G224100 Gossypium hirsutum
Gorai.004G238000 Gossypium raimondii
GSVIVG01031193001 Vitis vinifera
HanXRQChr09g0249921 Helianthus annuus
HanXRQChr16g0507601 Helianthus annuus
Haze_04098 Corylus avellana
Hma1.2p1_1320F.1_g275300 Hydrangea macrophylla
HPP92_013965 Vanilla planifolia
Hund07120 Selenicereus undatus
Lalb_Chr06g0167581 Lupinus albus
Lj5g0023717 Lotus japonicus
Lj9P203T13 Lonicera japonica
Manes.11G104600 Manihot esculenta
MD04G1196700 Malus domestica
MD12G1209600 Malus domestica
Medtr1g083740 Medicago truncatula
MELO3C015270.2 Cucumis melo
Migut.B01003 Erythranthe guttata
MSTRG.20400 Avicennia marina
Nitab4.5_0002612g0030 Nicotiana tabacum
Nitab4.5_0022030g0010 Nicotiana tabacum
Nn3g19136 Nelumbo nucifera
Nn4g25698 Nelumbo nucifera
Oeu020893.1 Olea europaea
Os04g0363700 Oryza sativa ssp. japonica
Os05g0509700 Oryza sativa ssp. japonica
Peaxi162Scf00037g01814 Petunia axillaris
PGR031G0196 Punica granatum
PGSC0003DMG400024729 Solanum tuberosum
Phvul.007G199200 Phaseolus vulgaris
Potri.013G011800 Populus trichocarpa
Prupe.6G317000 Prunus persica
Psat0s1958g0160 Pisum sativum
PSO170G6291 Papaver somniferum
PSO302G0075 Papaver somniferum
QL03p017844 Quercus lobata
QL93p2009_0056 Quercus lobata
RcHm_v2.0_Chr3g0456561 Rosa chinensis
Rhsim05G0135700 Rhododendron simsii
Rhsim11G0092300 Rhododendron simsii
SalBow1G3552 Salvia bowleyana
SalBow6G1600 Salvia bowleyana
SalBow7G4741 Salvia bowleyana
Sc06g0005800 Simmondsia chinensis
Sed0018825 Sechium edule
SGA_v2.0_scaffold4G01949 Striga asiatica
SHI18084 Sapria himalayana
Solyc01g100080.3 Solanum lycopersicum
Sopen01g043610 Solanum pennellii
Sp6g06390 Schrenkiella parvula
TAR365G0680 Trochodendron aralioides
TAR636G3513 Trochodendron aralioides
THA.LOC104818738 Tarenaya hassleriana
Thecc.02G279000 Theobroma cacao
Thecc.05G318800 Theobroma cacao
Thhalv10028973m.g Eutrema salsugineum
TPR.G17734 Trifolium pratense
TWI56G0784 Tripterygium wilfordii
unitig_747.g21338 Utricularia gibba
vmacro01534 Vaccinium macrocarpon
VMungo0720G1378 Vigna mungo
Zm00001eb292410 Zea mays

User provided reference genes

Program Settings