Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00060 Brassica napus
Aa31LG5G11450 Aethionema arabicum
Ah.15g089930 Amaranthus hybridus
AL6G10120 Arabidopsis lyrata
Aqoxy2G00712 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea
AT5G01910 Arabidopsis thaliana
ATR1127G190 Amborella trichopoda
Atru.chr8.92 Acer truncatum
AUR62006430 Chenopodium quinoa
AUR62029780 Chenopodium quinoa
BcaB01g04376 Brassica carinata
BcaB01g06123 Brassica carinata
BolC3t12589H Brassica oleracea
BraA03t09395Z Brassica rapa
C03p00200 Brassica napus
CANSAT25G2928 Cannabis sativa
CARHR212260 Cardamine hirsuta
Carub.0024s0013 Capsella rubella
Cc06_g18790 Coffea canephora
CDE06G1555 Ceratophyllum demersum
CDE07G1521 Ceratophyllum demersum
Cfa017015 Carpinus fangiana
Ciclev10013711m.g Citrus clementina
CiPaw.10G165400 Carya illinoinensis
ClCG04G006330 Citrullus lanatus
COL.COLO4_03930 Corchorus olitorius
Cpa.g.sc86.76 Carica papaya
CsaV3_4G027220 Cucumis sativus L.
DCAR_023968 Daucus carota
Dinv16967 Davidia involucrata
Duzib151G0817 Durio zibethinus
Duzib212G0164 Durio zibethinus
EL10Ac7g17114 Beta vulgaris
FAN02G2643 Fragaria x ananassa
FAN02G3877 Fragaria x ananassa
FAN05G1635 Fragaria x ananassa
FAN09G3593 Fragaria x ananassa
FAN14G4271 Fragaria x ananassa
FvH4_6g09670 Fragaria vesca
Glyma.09G273800 Glycine max
Glyma.18G213000 Glycine max
Glyma.19G150200 Glycine max
Gohir.A02G002800 Gossypium hirsutum
Gohir.A10G153400 Gossypium hirsutum
Gohir.D02G003100 Gossypium hirsutum
Gohir.D10G112800 Gossypium hirsutum
Gorai.005G003600 Gossypium raimondii
Gorai.011G124600 Gossypium raimondii
GSVIVG01030170001 Vitis vinifera
HanXRQChr01g0000581 Helianthus annuus
Haze_21189 Corylus avellana
HPP92_022865 Vanilla planifolia
Hund19755 Selenicereus undatus
Lalb_Chr01g0023811 Lupinus albus
Lj1g0009458 Lotus japonicus
Lsat_1_v5_gn_5_152061 Lactuca sativa
Manes.09G123300 Manihot esculenta
MBI03_g05807_MAGBIO Magnolia biondii
MD04G1175800 Malus domestica
MD05G1222900 Malus domestica
MD12G1190200 Malus domestica
Medtr7g073500 Medicago truncatula
MELO3C025225.2 Cucumis melo
Migut.J00029 Erythranthe guttata
MSTRG.18936 Avicennia marina
MSTRG.5490 Avicennia marina
Nitab4.5_0000048g0110 Nicotiana tabacum
Nitab4.5_0000430g0190 Nicotiana tabacum
Nitab4.5_0002655g0130 Nicotiana tabacum
Nitab4.5_0002758g0050 Nicotiana tabacum
Nn5g26829 Nelumbo nucifera
Oeu038184.1 Olea europaea
Oeu060427.1 Olea europaea
Peaxi162Scf00732g00235 Petunia axillaris
PGR004G2771 Punica granatum
PGSC0003DMG400027666 Solanum tuberosum
Phvul.008G081600 Phaseolus vulgaris
Potri.006G109400 Populus trichocarpa
Potri.016G138300 Populus trichocarpa
Prupe.6G295300 Prunus persica
Psat3g118680 Pisum sativum
PSO339G3220 Papaver somniferum
PSO384G0233 Papaver somniferum
QL07p007469 Quercus lobata
QL07p031897 Quercus lobata
RcHm_v2.0_Chr3g0460321 Rosa chinensis
Rhsim03G0028100 Rhododendron simsii
Rhsim04G0114700 Rhododendron simsii
Rhsim04G0121200 Rhododendron simsii
Rhsim08G0240100 Rhododendron simsii
Sabra04G0154500 Salix brachista
Sabra06G0085100 Salix brachista
SalBow7G4609 Salvia bowleyana
Sc20g0007050 Simmondsia chinensis
Sed0006435 Sechium edule
Solyc06g082850.4 Solanum lycopersicum
Sopen06g034210 Solanum pennellii
Sp6g41160 Schrenkiella parvula
TAR623G0846 Trochodendron aralioides
THA.LOC104823322 Tarenaya hassleriana
Thecc.04G150100 Theobroma cacao
Thhalv10015463m.g Eutrema salsugineum
TPR.G24295 Trifolium pratense
TWI74G1273 Tripterygium wilfordii
TWI77G0392 Tripterygium wilfordii
unitig_22.g6613 Utricularia gibba
unitig_8.g3270 Utricularia gibba
vmacro08947 Vaccinium macrocarpon
vmacro08948 Vaccinium macrocarpon
VMungo1383G3295 Vigna mungo

User provided reference genes

Program Settings