Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20550 Brassica napus
Aa31LG5G22560 Aethionema arabicum
Actinidia19669 Actinidia chinensis
Actinidia40023 Actinidia chinensis
AL4G33600 Arabidopsis lyrata
Aqoxy1G01281 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N37HG5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKM4A5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WXAM3F Arachis hypogaea
AT2G37230 Arabidopsis thaliana
ATR0048G002 Amborella trichopoda
Atru.BG.215.p Acer truncatum
Atru.chr8.1857 Acer truncatum
AUR62029073 Chenopodium quinoa
AUR62031649 Chenopodium quinoa
BolC3t14808H Brassica oleracea
BraA03t11298Z Brassica rapa
C01p14720 Brassica napus
C03p24150 Brassica napus
CAN.G1251.7 Capsicum annuum
CAN.G771.41 Capsicum annuum
CANSAT64G0911 Cannabis sativa
CARHR132360 Cardamine hirsuta
Carub.0004s1913 Capsella rubella
Ca_02412_v3 Cicer arietinum L.
Cc02_g24050 Coffea canephora
CDE05G3024 Ceratophyllum demersum
CDE07G1228 Ceratophyllum demersum
Cfa009828 Carpinus fangiana
Ciclev10010464m.g Citrus clementina
Ciclev10011107m.g Citrus clementina
CiPaw.09G174800 Carya illinoinensis
ClCG06G012850 Citrullus lanatus
COL.COLO4_05681 Corchorus olitorius
Cpa.g.sc12.262 Carica papaya
CsaV3_1G029410 Cucumis sativus L.
CSS0025033 Camellia sinensis var. sinensis
CSS0044827 Camellia sinensis var. sinensis
DCAR_014988 Daucus carota
DCAR_017698 Daucus carota
Dinv35763 Davidia involucrata
Duzib151G0326 Durio zibethinus
ECA233G1366 Erigeron canadensis
ECA238G1938 Erigeron canadensis
EL10Ac2g03436 Beta vulgaris
Eucgr.F02345 Eucalyptus grandis
FAN04G2606 Fragaria x ananassa
FAN08G1176 Fragaria x ananassa
FAN13G2385 Fragaria x ananassa
FAN18G1734 Fragaria x ananassa
FvH4_5g34800 Fragaria vesca
Glyma.05G142300 Glycine max
Glyma.08G098100 Glycine max
Gohir.A02G001400 Gossypium hirsutum
Gohir.D02G001700 Gossypium hirsutum
Gorai.005G002200 Gossypium raimondii
GSVIVG01025698001 Vitis vinifera
HanXRQChr14g0454271 Helianthus annuus
HanXRQChr15g0464611 Helianthus annuus
Haze_23189 Corylus avellana
HPP92_008973 Vanilla planifolia
HPP92_008974 Vanilla planifolia
Lalb_Chr07g0187591 Lupinus albus
Lj2C113T11 Lonicera japonica
Lj4g0004954 Lotus japonicus
Lsat_1_v5_gn_6_30921 Lactuca sativa
Manes.09G067900 Manihot esculenta
MBI14_g24889_MAGBIO Magnolia biondii
MD08G1198800 Malus domestica
MD15G1385700 Malus domestica
Medtr2g437460 Medicago truncatula
MELO3C010175.2 Cucumis melo
Migut.J00539 Erythranthe guttata
MSTRG.19161 Avicennia marina
Nitab4.5_0003215g0040 Nicotiana tabacum
Nitab4.5_0026741g0010 Nicotiana tabacum
Nn1g00512 Nelumbo nucifera
Nn5g27420 Nelumbo nucifera
Oeu059611.1 Olea europaea
Os02g0110400 Oryza sativa ssp. japonica
Peaxi162Scf00046g00155 Petunia axillaris
PGR004G1979 Punica granatum
PGSC0003DMG400020392 Solanum tuberosum
Phvul.002G180100 Phaseolus vulgaris
Potri.010G077400 Populus trichocarpa
Prupe.1G532500 Prunus persica
Psat1g151920 Pisum sativum
PSO541G6013 Papaver somniferum
PSO675G3058 Papaver somniferum
QL07p044267 Quercus lobata
QL11p050841 Quercus lobata
QL93p2024_0074 Quercus lobata
RcHm_v2.0_Chr5g0052611 Rosa chinensis
RcHm_v2.0_Chr6g0274921 Rosa chinensis
Rhsim05G0180300 Rhododendron simsii
Sabra10G0031400 Salix brachista
SalBow3G1009 Salvia bowleyana
SalBow3G2352 Salvia bowleyana
Sc14g0006050 Simmondsia chinensis
Sc14g0006060 Simmondsia chinensis
Sed0004940 Sechium edule
Sed0019079 Sechium edule
Sed0027887 Sechium edule
SEGI_25780 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24862 Striga asiatica
SGA_v2.0_scaffold7G03966 Striga asiatica
Solyc12g019290.1 Solanum lycopersicum
Sopen12g009600 Solanum pennellii
Sp4g19550 Schrenkiella parvula
THA.LOC104806598 Tarenaya hassleriana
Thecc.04G147700 Theobroma cacao
Thhalv10017966m.g Eutrema salsugineum
TPR.G37863 Trifolium pratense
TWI53G1265 Tripterygium wilfordii
TWI74G0655 Tripterygium wilfordii
VMungo0251G0948 Vigna mungo
Zm00001eb229640 Zea mays

User provided reference genes

Program Settings