Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05510 Brassica napus
A03p09460 Brassica napus
Aa31LG1G8830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis
Actinidia23989 Actinidia chinensis
Ah.04g159740 Amaranthus hybridus
AL6G30860 Arabidopsis lyrata
Aqoxy1G00395 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea
AT5G19370 Arabidopsis thaliana
ATR0621G006 Amborella trichopoda
Atru.chr3.2952 Acer truncatum
Atru.chr3.2957 Acer truncatum
AUR62000204 Chenopodium quinoa
AUR62006552 Chenopodium quinoa
AUR62040469 Chenopodium quinoa
AUR62042212 Chenopodium quinoa
BcaB01g04864 Brassica carinata
BcaB01g05143 Brassica carinata
BcaC03g13669 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus
BolC3t13573H Brassica oleracea
BraA02t05502Z Brassica rapa
BraA03t10264Z Brassica rapa
C03p11040 Brassica napus
CAN.G1305.17 Capsicum annuum
CANSAT54G1770 Cannabis sativa
CARHR193590 Cardamine hirsuta
Carub.0006s1771 Capsella rubella
Ca_06199_v3 Cicer arietinum L.
CBR_g54969 Chara braunii
Cc00_g17410 Coffea canephora
CDE02G1620 Ceratophyllum demersum
Cfa009884 Carpinus fangiana
Ciclev10017644m.g Citrus clementina
CiPaw.14G111900 Carya illinoinensis
ClCG02G022800 Citrullus lanatus
COL.COLO4_24491 Corchorus olitorius
Cpa.g.sc157.57 Carica papaya
Cre07.g350400 Chlamydomonas reinhardtii
CsaV3_6G038930 Cucumis sativus L.
CSS0020940 Camellia sinensis var. sinensis
CSS0040024 Camellia sinensis var. sinensis
CSS0040434 Camellia sinensis var. sinensis
DCAR_024400 Daucus carota
Dinv36157 Davidia involucrata
Duzib170G0239 Durio zibethinus
ECA233G4787 Erigeron canadensis
EL10Ac4g10106 Beta vulgaris
Eucgr.J00687 Eucalyptus grandis
FAN11G2659 Fragaria x ananassa
FAN21G1036 Fragaria x ananassa
FAN25G1664 Fragaria x ananassa
FvH4_3g27810 Fragaria vesca
Glyma.02G279000 Glycine max
Glyma.14G035700 Glycine max
Gohir.A07G121100 Gossypium hirsutum
Gohir.D07G125300 Gossypium hirsutum
Gorai.001G135100 Gossypium raimondii
GSVIVG01037292001 Vitis vinifera
HanXRQChr13g0390131 Helianthus annuus
Haze_23248 Corylus avellana
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla
HPP92_028459 Vanilla planifolia
Hund21973 Selenicereus undatus
Lalb_Chr04g0249261 Lupinus albus
Lj2C622G16 Lonicera japonica
LjContig00564g0004002 Lotus japonicus
Lsat_1_v5_gn_5_65341 Lactuca sativa
Manes.02G138400 Manihot esculenta
Mapoly0003s0043 Marchantia polymorpha
MCO13G336 Micromonas commoda
MD11G1184200 Malus domestica
Medtr5g089330 Medicago truncatula
MELO3C014557.2 Cucumis melo
Migut.D00669 Erythranthe guttata
Nitab4.5_0001290g0120 Nicotiana tabacum
Nitab4.5_0002310g0120 Nicotiana tabacum
Nn2g14782 Nelumbo nucifera
Nn7g36750 Nelumbo nucifera
Oeu061700.1 Olea europaea
Os07g0687500 Oryza sativa ssp. japonica
Peaxi162Scf00174g00223 Petunia axillaris
Peaxi162Scf00272g00828 Petunia axillaris
PGR119G2402 Punica granatum
PGSC0003DMG401004716 Solanum tuberosum
Phvul.008G201800 Phaseolus vulgaris
Potri.009G069300 Populus trichocarpa
Pp3c3_13280 Physcomitrium patens
Prupe.4G263800 Prunus persica
Psat2g020720 Pisum sativum
PSO339G0647 Papaver somniferum
PSO384G2846 Papaver somniferum
QL01p016926 Quercus lobata
QL02p019212 Quercus lobata
RcHm_v2.0_Chr5g0050451 Rosa chinensis
Rhsim01G0195300 Rhododendron simsii
Sabra09G0052200 Salix brachista
SalBow6G4024 Salvia bowleyana
Sc16g0011000 Simmondsia chinensis
Sed0005347 Sechium edule
SEGI_16296 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04541 Striga asiatica
SMO145G0007 Selaginella moellendorffii
Solyc12g099800.2 Solanum lycopersicum
Sopen12g034430 Solanum pennellii
Sp6g25040 Schrenkiella parvula
TAR623G0610 Trochodendron aralioides
THA.LOC104811194 Tarenaya hassleriana
Thecc.09G246900 Theobroma cacao
Thhalv10014227m.g Eutrema salsugineum
TPR.G16393 Trifolium pratense
TPR.G16411 Trifolium pratense
TWI31G1173 Tripterygium wilfordii
TWI79G0794 Tripterygium wilfordii
unitig_62.g23875 Utricularia gibba
vmacro14276 Vaccinium macrocarpon
VMungo0647G1137 Vigna mungo
Zm00001eb331180 Zea mays

User provided reference genes

Program Settings