Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p37420 Brassica napus
Aa31LG8G3900 Aethionema arabicum
Actinidia32966 Actinidia chinensis
Ah.04g153530 Amaranthus hybridus
AL3G29800 Arabidopsis lyrata
Aqoxy5G00104 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.15AJKM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.18206K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W310LH Arachis hypogaea
AT3G16840 Arabidopsis thaliana
ATR1096G059 Amborella trichopoda
Atru.chr4.1879 Acer truncatum
AUR62006490 Chenopodium quinoa
AUR62025043 Chenopodium quinoa
BcaB04g20873 Brassica carinata
BcaC09g48642 Brassica carinata
BolC1t04705H Brassica oleracea
BraA01t03799Z Brassica rapa
C01p47350 Brassica napus
CAN.G812.30 Capsicum annuum
CANSAT78G0248 Cannabis sativa
CARHR092100 Cardamine hirsuta
CARHR247950 Cardamine hirsuta
CARHR293710 Cardamine hirsuta
Carub.0003s1655 Capsella rubella
Ca_03626_v3 Cicer arietinum L.
CBR_g11163 Chara braunii
Cc03_g06800 Coffea canephora
CDE02G1179 Ceratophyllum demersum
Cfa014812 Carpinus fangiana
Ciclev10004340m.g Citrus clementina
CiPaw.01G175600 Carya illinoinensis
ClCG06G007350 Citrullus lanatus
COL.COLO4_15998 Corchorus olitorius
Cpa.g.sc59.34 Carica papaya
Cre01.g022350 Chlamydomonas reinhardtii
CsaV3_2G012320 Cucumis sativus L.
CSS0002689 Camellia sinensis var. sinensis
CSS0035942 Camellia sinensis var. sinensis
DCAR_024298 Daucus carota
Dinv29787 Davidia involucrata
Duzib151G1189 Durio zibethinus
ECA232G0211 Erigeron canadensis
ECA232G1204 Erigeron canadensis
ECA232G3455 Erigeron canadensis
EL10Ac3g06715 Beta vulgaris
Eucgr.H02888 Eucalyptus grandis
FAN19G1189 Fragaria x ananassa
FAN23G0160 Fragaria x ananassa
FAN28G1398 Fragaria x ananassa
FvH4_1g29910 Fragaria vesca
Glyma.03G014666 Glycine max
Glyma.03G014732 Glycine max
Glyma.07G074800 Glycine max
Gohir.A09G230200 Gossypium hirsutum
Gohir.D09G231300 Gossypium hirsutum
Gorai.006G254000 Gossypium raimondii
GSVIVG01027957001 Vitis vinifera
HanXRQChr14g0434201 Helianthus annuus
Haze_11492 Corylus avellana
Haze_26911 Corylus avellana
Hma1.2p1_0112F.1_g054935 Hydrangea macrophylla
Hma1.2p1_0112F.1_g054940 Hydrangea macrophylla
HPP92_005024 Vanilla planifolia
Hund20473 Selenicereus undatus
Hund20474 Selenicereus undatus
Lalb_Chr10g0097291 Lupinus albus
Lj3C638G9 Lonicera japonica
Lj3g0023133 Lotus japonicus
Lsat_1_v5_gn_2_42041 Lactuca sativa
Manes.15G047300 Manihot esculenta
Mapoly0133s0003 Marchantia polymorpha
MBI10_g26047_MAGBIO Magnolia biondii
MCO16G177 Micromonas commoda
MD09G1270900 Malus domestica
MD12G1094500 Malus domestica
MD14G1084300 Malus domestica
Medtr7g057250 Medicago truncatula
MELO3C023052.2 Cucumis melo
Migut.G00589 Erythranthe guttata
MSTRG.4184 Avicennia marina
Nitab4.5_0002937g0050 Nicotiana tabacum
Nitab4.5_0003474g0040 Nicotiana tabacum
Nn1g03022 Nelumbo nucifera
Oeu023144.1 Olea europaea
Os04g0510400 Oryza sativa ssp. japonica
Peaxi162Scf00125g01324 Petunia axillaris
PGR142G3130 Punica granatum
PGSC0003DMG400001506 Solanum tuberosum
Phvul.010G094600 Phaseolus vulgaris
Potri.010G063600 Populus trichocarpa
Pp3c17_22010 Physcomitrium patens
PRCOL_00001656 Prasinoderma coloniale
Prupe.5G037600 Prunus persica
Psat3g117880 Pisum sativum
Psat3g146960 Pisum sativum
PSO063G0133 Papaver somniferum
PSO339G1682 Papaver somniferum
PSO675G8858 Papaver somniferum
RcHm_v2.0_Chr3g0492441 Rosa chinensis
Rhsim09G0043500 Rhododendron simsii
Sabra10G0043300 Salix brachista
SalBow2G1692 Salvia bowleyana
Sc13g0003050 Simmondsia chinensis
Sed0024548 Sechium edule
SGA_v2.0_scaffold86G26859 Striga asiatica
SHI00856 Sapria himalayana
SMO134G0139 Selaginella moellendorffii
Solyc09g090740.4 Solanum lycopersicum
Sopen09g033680 Solanum pennellii
Sp3g15080 Schrenkiella parvula
TAR365G0107 Trochodendron aralioides
THA.LOC104802593 Tarenaya hassleriana
Thecc.04G268600 Theobroma cacao
Thhalv10020025m.g Eutrema salsugineum
TPR.G9295 Trifolium pratense
TWI73G0114 Tripterygium wilfordii
unitig_899.g14854 Utricularia gibba
vmacro00534 Vaccinium macrocarpon
VMungo0331G1285 Vigna mungo
Zm00001eb077380 Zea mays

User provided reference genes

Program Settings