Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p24510 Brassica napus
Aa31sc24G140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3773 Anthoceros agrestis
Actinidia02939 Actinidia chinensis
Actinidia23669 Actinidia chinensis
Ah.16g102450 Amaranthus hybridus
AL6G24460 Arabidopsis lyrata
Aqoxy1G00906 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5RG0UU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5T6QS1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.67Z0GV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.96VUID Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C8L4QR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KN5X6X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PJ9UI9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TGUH8U Arachis hypogaea
AT5G13830 Arabidopsis thaliana
ATR0559G152 Amborella trichopoda
Atru.chr12.422 Acer truncatum
AUR62012110 Chenopodium quinoa
AUR62039361 Chenopodium quinoa
BcaC04g19074 Brassica carinata
BcaC04g24249 Brassica carinata
BolC9t59161H Brassica oleracea
BraA10t44516Z Brassica rapa
C09p63250 Brassica napus
CANSAT56G0033 Cannabis sativa
CANSAT56G2206 Cannabis sativa
CARHR199600 Cardamine hirsuta
Carub.0006s1202 Capsella rubella
Ca_05884_v3 Cicer arietinum L.
CBR_g49713 Chara braunii
Cc02_g07640 Coffea canephora
Cc08_g07630 Coffea canephora
CDE07G1400 Ceratophyllum demersum
Ciclev10033366m.g Citrus clementina
CiPaw.01G289000 Carya illinoinensis
ClCG09G019630 Citrullus lanatus
COL.COLO4_15080 Corchorus olitorius
Cpa.g.sc1.423 Carica papaya
Cre06.g302650 Chlamydomonas reinhardtii
CsaV3_5G026760 Cucumis sativus L.
CSS0042327 Camellia sinensis var. sinensis
DCAR_011715 Daucus carota
Dinv03705 Davidia involucrata
Dinv15863 Davidia involucrata
Duzib114G1044 Durio zibethinus
ECA238G1917 Erigeron canadensis
EL10Ac2g04730 Beta vulgaris
Eucgr.G02942 Eucalyptus grandis
FAN01G0003 Fragaria x ananassa
FAN01G0853 Fragaria x ananassa
FAN03G0736 Fragaria x ananassa
FAN06G1109 Fragaria x ananassa
FAN06G3404 Fragaria x ananassa
FAN10G0859 Fragaria x ananassa
FvH4_7g22770 Fragaria vesca
Glyma.14G067900 Glycine max
Gohir.A05G348500 Gossypium hirsutum
Gohir.D04G064000 Gossypium hirsutum
Gorai.012G071600 Gossypium raimondii
GSVIVG01016519001 Vitis vinifera
HanXRQChr07g0201431 Helianthus annuus
Haze_17085 Corylus avellana
HPP92_015540 Vanilla planifolia
Hund16077 Selenicereus undatus
Lalb_Chr10g0104601 Lupinus albus
Lj1C939G12 Lonicera japonica
LjContig00141g0009707 Lotus japonicus
Lsat_1_v5_gn_2_118400 Lactuca sativa
Lsat_1_v5_gn_7_16440 Lactuca sativa
Manes.10G029100 Manihot esculenta
Mapoly0038s0066 Marchantia polymorpha
MBI14_g12127_MAGBIO Magnolia biondii
MCO07G108 Micromonas commoda
MD01G1135900 Malus domestica
MD07G1200600 Malus domestica
Medtr5g080020 Medicago truncatula
MELO3C021618.2 Cucumis melo
MELO3C030766.2 Cucumis melo
Migut.F01454 Erythranthe guttata
MSTRG.278 Avicennia marina
Nitab4.5_0000004g0130 Nicotiana tabacum
Nitab4.5_0001040g0050 Nicotiana tabacum
Nitab4.5_0001655g0150 Nicotiana tabacum
Nitab4.5_0004559g0030 Nicotiana tabacum
Nn2g11152 Nelumbo nucifera
Nn8g38773 Nelumbo nucifera
Oeu016465.1 Olea europaea
Os03g0822300 Oryza sativa ssp. japonica
Peaxi162Scf00658g00085 Petunia axillaris
PGR142G0925 Punica granatum
Phvul.008G232100 Phaseolus vulgaris
Potri.010G202200 Populus trichocarpa
Pp3c22_17560 Physcomitrium patens
PRCOL_00004637 Prasinoderma coloniale
Prupe.2G237400 Prunus persica
PSO339G5561 Papaver somniferum
PSO513G0162 Papaver somniferum
QL02p008420 Quercus lobata
QL08p059471 Quercus lobata
RcHm_v2.0_Chr1g0367871 Rosa chinensis
Sabra10G0156100 Salix brachista
SalBow6G0031 Salvia bowleyana
Sc14g0004660 Simmondsia chinensis
Sed0022265 Sechium edule
SEGI_07978 Sequoiadendron giganteum
SGA_v2.0_scaffold221G42676 Striga asiatica
SHI30748 Sapria himalayana
SMO145G0100 Selaginella moellendorffii
Sp6g30170 Schrenkiella parvula
TAR633G0385 Trochodendron aralioides
THA.LOC104826739 Tarenaya hassleriana
Thecc.10G036400 Theobroma cacao
Thhalv10014583m.g Eutrema salsugineum
TPR.G3462 Trifolium pratense
TWI15G0822 Tripterygium wilfordii
unitig_61.g26158 Utricularia gibba
unitig_70.g32538 Utricularia gibba
vmacro07184 Vaccinium macrocarpon
VMungo0647G1953 Vigna mungo
Zm00001eb062790 Zea mays

User provided reference genes

Program Settings