Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p08790 Brassica napus
A09p33350 Brassica napus
Aa31LG6G7550 Aethionema arabicum
Aa31LG6G7570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2484 Anthoceros agrestis
Actinidia22227 Actinidia chinensis
AL1G47290 Arabidopsis lyrata
Aqoxy5G04350 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IPH7D2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TN6CXG Arachis hypogaea
AT1G32990 Arabidopsis thaliana
AT5G51610 Arabidopsis thaliana
ATR0661G185 Amborella trichopoda
Atru.chr9.1843 Acer truncatum
AUR62007082 Chenopodium quinoa
AUR62019945 Chenopodium quinoa
BcaC05g27324 Brassica carinata
BcaC07g37574 Brassica carinata
BolC5t31976H Brassica oleracea
BraA09t38878Z Brassica rapa
C05p32430 Brassica napus
CAN.G567.110 Capsicum annuum
CANSAT21G1421 Cannabis sativa
CARHR032330 Cardamine hirsuta
CARHR151050 Cardamine hirsuta
Carub.0001s3129 Capsella rubella
Carub.0008s1165 Capsella rubella
Ca_16293_v3 Cicer arietinum L.
CBR_g23337 Chara braunii
Cc08_g17010 Coffea canephora
CDE04G2742 Ceratophyllum demersum
CDE12G0198 Ceratophyllum demersum
Cfa011892 Carpinus fangiana
Ciclev10022134m.g Citrus clementina
CiPaw.11G109300 Carya illinoinensis
ClCG01G001360 Citrullus lanatus
COL.COLO4_10838 Corchorus olitorius
Cre10.g423650 Chlamydomonas reinhardtii
CsaV3_5G001490 Cucumis sativus L.
CSS0024814 Camellia sinensis var. sinensis
DCAR_006568 Daucus carota
Dinv18771 Davidia involucrata
Duzib068G1233 Durio zibethinus
EL10Ac5g12396 Beta vulgaris
Eucgr.D01648 Eucalyptus grandis
FAN04G0127 Fragaria x ananassa
FAN08G2575 Fragaria x ananassa
FAN13G0292 Fragaria x ananassa
FAN18G2603 Fragaria x ananassa
FvH4_5g10460 Fragaria vesca
Glyma.01G201000 Glycine max
Glyma.13G000900 Glycine max
Gohir.A11G017800 Gossypium hirsutum
Gohir.D11G017600 Gossypium hirsutum
Gorai.007G018600 Gossypium raimondii
GSVIVG01019689001 Vitis vinifera
HanXRQChr07g0203121 Helianthus annuus
HanXRQChr14g0459431 Helianthus annuus
Haze_09208 Corylus avellana
Hma1.2p1_0436F.1_g152860 Hydrangea macrophylla
HPP92_018477 Vanilla planifolia
HPP92_018485 Vanilla planifolia
Hund11340 Selenicereus undatus
Hund11500 Selenicereus undatus
Lalb_Chr14g0362621 Lupinus albus
Lj3A1079G50 Lonicera japonica
Lj6g0013288 Lotus japonicus
Lsat_1_v5_gn_2_123641 Lactuca sativa
Manes.01G000465 Manihot esculenta
Mapoly0003s0224 Marchantia polymorpha
MBI04_g09603_MAGBIO Magnolia biondii
MCO12G206 Micromonas commoda
MD06G1123700 Malus domestica
MD14G1139900 Malus domestica
Medtr3g080800 Medicago truncatula
MELO3C005800.2 Cucumis melo
Migut.E00720 Erythranthe guttata
MSTRG.2034 Avicennia marina
Nitab4.5_0008664g0010 Nicotiana tabacum
Nn3g18784 Nelumbo nucifera
Os03g0122200 Oryza sativa ssp. japonica
Peaxi162Scf00074g00020 Petunia axillaris
PGR031G0783 Punica granatum
PGSC0003DMG400012225 Solanum tuberosum
Phvul.006G007380 Phaseolus vulgaris
Potri.001G450800 Populus trichocarpa
Potri.011G150700 Populus trichocarpa
Pp3c10_12450 Physcomitrium patens
Pp3c12_19370 Physcomitrium patens
Pp3c2_26030 Physcomitrium patens
Pp3c3_20370 Physcomitrium patens
PRCOL_00000934 Prasinoderma coloniale
Prupe.5G134200 Prunus persica
Psat5g110320 Pisum sativum
PSO063G0078 Papaver somniferum
PSO782G3318 Papaver somniferum
QL02p027188 Quercus lobata
QL05p022244 Quercus lobata
QL09p002605 Quercus lobata
RcHm_v2.0_Chr7g0187751 Rosa chinensis
Sabra11G0149800 Salix brachista
Sabra16G0304500 Salix brachista
Sc01g0010890 Simmondsia chinensis
Sed0006934 Sechium edule
SEGI_00983 Sequoiadendron giganteum
SEGI_14573 Sequoiadendron giganteum
SGA_v2.0_scaffold88G27241 Striga asiatica
SMO347G0410 Selaginella moellendorffii
Solyc08g083350.4 Solanum lycopersicum
Sopen08g031560 Solanum pennellii
Sp1g28010 Schrenkiella parvula
TAR375G1066 Trochodendron aralioides
TAR578G0001 Trochodendron aralioides
TAR580G0002 Trochodendron aralioides
THA.LOC104815429 Tarenaya hassleriana
Thecc.03G216600 Theobroma cacao
Thhalv10008713m.g Eutrema salsugineum
TPR.G21327 Trifolium pratense
TWI60G0138 Tripterygium wilfordii
unitig_744.g24032 Utricularia gibba
vmacro11481 Vaccinium macrocarpon
Zm00001eb001640 Zea mays

User provided reference genes

Program Settings