Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG9G12490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis
Ah.13g071040 Amaranthus hybridus
AL8G16350 Arabidopsis lyrata
Aqoxy2G03351 Aquilegia oxysepala
Aqoxy2G03352 Aquilegia oxysepala
Aqoxy6G01598 Aquilegia oxysepala
AT5G43822 Arabidopsis thaliana
ATR0807G089 Amborella trichopoda
Atru.chr3.42 Acer truncatum
Atru.chr3.582 Acer truncatum
AUR62005948 Chenopodium quinoa
AUR62028117 Chenopodium quinoa
BcaC04g21903 Brassica carinata
BcaC06g31675 Brassica carinata
BcaC06g34624 Brassica carinata
BraA06t27635Z Brassica rapa
CAN.G1138.9 Capsicum annuum
CANSAT54G1336 Cannabis sativa
CARHR179670 Cardamine hirsuta
Carub.0008s0481 Capsella rubella
Ca_19713_v3 Cicer arietinum L.
CBR_g30123 Chara braunii
Cc10_g14910 Coffea canephora
CDE02G0900 Ceratophyllum demersum
CDE04G0756 Ceratophyllum demersum
Cfa010319 Carpinus fangiana
Cfa015562 Carpinus fangiana
Cfa020797 Carpinus fangiana
Ciclev10002549m.g Citrus clementina
CiPaw.07G136100 Carya illinoinensis
ClCG02G003390 Citrullus lanatus
COL.COLO4_07395 Corchorus olitorius
COL.COLO4_22727 Corchorus olitorius
Cpa.g.sc26.165 Carica papaya
Cre12.g556200 Chlamydomonas reinhardtii
CsaV3_7G001930 Cucumis sativus L.
CSS0000785 Camellia sinensis var. sinensis
CSS0011114 Camellia sinensis var. sinensis
CSS0028139 Camellia sinensis var. sinensis
CSS0036253 Camellia sinensis var. sinensis
DCAR_013930 Daucus carota
Dinv27390 Davidia involucrata
Duzib205G0266 Durio zibethinus
Duzib205G1379 Durio zibethinus
ECA232G3411 Erigeron canadensis
EL10Ac3g05131 Beta vulgaris
Eucgr.F01788 Eucalyptus grandis
FAN04G1358 Fragaria x ananassa
FAN08G2005 Fragaria x ananassa
FAN13G1910 Fragaria x ananassa
FAN18G3620 Fragaria x ananassa
FvH4_5g25620 Fragaria vesca
FvH4_6g22960 Fragaria vesca
Gohir.A09G046800 Gossypium hirsutum
Gohir.D09G047201 Gossypium hirsutum
Gorai.006G062900 Gossypium raimondii
GSVIVG01013394001 Vitis vinifera
HanXRQChr02g0057271 Helianthus annuus
HanXRQChr05g0147651 Helianthus annuus
Haze_19181 Corylus avellana
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla
HPP92_007449 Vanilla planifolia
Hund21079 Selenicereus undatus
Lalb_Chr01g0007731 Lupinus albus
Lj4C809G7 Lonicera japonica
Lj6g0027905 Lotus japonicus
Lsat_1_v5_gn_0_27580 Lactuca sativa
Lsat_1_v5_gn_9_28760 Lactuca sativa
Manes.13G069100 Manihot esculenta
Mapoly0033s0101 Marchantia polymorpha
MBI06_g19633_MAGBIO Magnolia biondii
MCO04G502 Micromonas commoda
MD08G1245100 Malus domestica
MD08G1245200 Malus domestica
MD15G1440200 Malus domestica
Medtr1g103240 Medicago truncatula
Medtr4g032370 Medicago truncatula
MELO3C013247.2 Cucumis melo
Migut.E01492 Erythranthe guttata
MSTRG.990 Avicennia marina
Nitab4.5_0000383g0410 Nicotiana tabacum
Nitab4.5_0001208g0130 Nicotiana tabacum
Nitab4.5_0010095g0020 Nicotiana tabacum
Nn5g31001 Nelumbo nucifera
Oeu011315.3 Olea europaea
Os10g0566900 Oryza sativa ssp. japonica
Peaxi162Scf00139g00094 Petunia axillaris
Peaxi162Scf00680g00119 Petunia axillaris
PGR083G0938 Punica granatum
Phvul.006G060400 Phaseolus vulgaris
Phvul.006G070300 Phaseolus vulgaris
Phvul.008G111000 Phaseolus vulgaris
Potri.005G253200 Populus trichocarpa
Pp3c20_21140 Physcomitrium patens
Prupe.5G009200 Prunus persica
Psat7g226480 Pisum sativum
PSO541G3394 Papaver somniferum
PSO675G3428 Papaver somniferum
QL02p015123 Quercus lobata
RcHm_v2.0_Chr3g0481381 Rosa chinensis
RcHm_v2.0_Chr3g0481391 Rosa chinensis
RcHm_v2.0_Chr7g0215911 Rosa chinensis
Rhsim08G0078300 Rhododendron simsii
Sabra05G0196400 Salix brachista
SalBow1G3286 Salvia bowleyana
SalBow6G0872 Salvia bowleyana
SalBow7G4342 Salvia bowleyana
Sc24g0000300 Simmondsia chinensis
Sed0007887 Sechium edule
SGA_v2.0_scaffold184G39969 Striga asiatica
SHI14582 Sapria himalayana
Solyc08g069130.1 Solanum lycopersicum
Sopen04g036190 Solanum pennellii
TAR625G0363 Trochodendron aralioides
THA.LOC104820569 Tarenaya hassleriana
Thecc.03G029100 Theobroma cacao
Thhalv10003275m.g Eutrema salsugineum
TPR.G34155 Trifolium pratense
unitig_46.g18025 Utricularia gibba
vmacro05542 Vaccinium macrocarpon
VMungo0540G0999 Vigna mungo
Zm00001eb327920 Zea mays

User provided reference genes

Program Settings