Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p25300 Brassica napus
Aa31LG10G15180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis
Actinidia27830 Actinidia chinensis
Actinidia38288 Actinidia chinensis
AL5G43290 Arabidopsis lyrata
Aqoxy5G03975 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea
AT3G61080 Arabidopsis thaliana
ATR0620G127 Amborella trichopoda
ATR0757G200 Amborella trichopoda
Atru.chr5.403 Acer truncatum
AUR62004291 Chenopodium quinoa
BcaB02g07390 Brassica carinata
BcaC08g45098 Brassica carinata
BolC6t37878H Brassica oleracea
BraA07t30173Z Brassica rapa
C06p27060 Brassica napus
CAN.G170.50 Capsicum annuum
CANSAT56G2190 Cannabis sativa
CARHR171390 Cardamine hirsuta
Carub.0005s2773 Capsella rubella
Ca_23755_v3 Cicer arietinum L.
Ca_28970_v3 Cicer arietinum L.
CBR_g38943 Chara braunii
Cc00_g22860 Coffea canephora
Cc02_g37230 Coffea canephora
Cc02_g37660 Coffea canephora
CDE01G0065 Ceratophyllum demersum
Cfa004182 Carpinus fangiana
Cfa024407 Carpinus fangiana
Ciclev10021113m.g Citrus clementina
CiPaw.01G023800 Carya illinoinensis
CiPaw.01G052800 Carya illinoinensis
CiPaw.01G053600 Carya illinoinensis
ClCG05G001910 Citrullus lanatus
COL.COLO4_12625 Corchorus olitorius
Cpa.g.sc18.197 Carica papaya
Cre12.g542202 Chlamydomonas reinhardtii
CsaV3_3G009310 Cucumis sativus L.
CSS0035566 Camellia sinensis var. sinensis
DCAR_025170 Daucus carota
Dinv32422 Davidia involucrata
Duzib138G1515 Durio zibethinus
ECA236G1148 Erigeron canadensis
EL10Ac1g00963 Beta vulgaris
Eucgr.E00217 Eucalyptus grandis
FAN01G2003 Fragaria x ananassa
FAN03G2411 Fragaria x ananassa
FAN06G0540 Fragaria x ananassa
FAN06G3976 Fragaria x ananassa
FAN10G0301 Fragaria x ananassa
FAN10G2923 Fragaria x ananassa
FvH4_7g13130 Fragaria vesca
Glyma.03G017600 Glycine max
Glyma.07G078900 Glycine max
Gohir.A11G084900 Gossypium hirsutum
Gohir.A11G085000 Gossypium hirsutum
Gohir.D11G089100 Gossypium hirsutum
Gorai.007G095100 Gossypium raimondii
GSVIVG01027527001 Vitis vinifera
HanXRQChr06g0169031 Helianthus annuus
Haze_15226 Corylus avellana
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla
HPP92_014577 Vanilla planifolia
Hund27325 Selenicereus undatus
Lalb_Chr10g0097531 Lupinus albus
Lj3g0006580 Lotus japonicus
Lj7A519G38 Lonicera japonica
Lsat_1_v5_gn_7_8501 Lactuca sativa
Manes.01G262400 Manihot esculenta
Mapoly0138s0005 Marchantia polymorpha
MBI12_g25033_MAGBIO Magnolia biondii
MBI16_g15528_MAGBIO Magnolia biondii
MCO14G366 Micromonas commoda
MD07G1128500 Malus domestica
Medtr8g032700 Medicago truncatula
MELO3C006151.2 Cucumis melo
Migut.B01688 Erythranthe guttata
Nitab4.5_0004550g0130 Nicotiana tabacum
Nitab4.5_0010430g0060 Nicotiana tabacum
Nn1g01350 Nelumbo nucifera
Oeu024416.1 Olea europaea
Os03g0117800 Oryza sativa ssp. japonica
Peaxi162Scf00021g00525 Petunia axillaris
PGR042G1311 Punica granatum
PGSC0003DMG400017054 Solanum tuberosum
Phvul.010G092700 Phaseolus vulgaris
Potri.002G153100 Populus trichocarpa
Pp3c15_5030 Physcomitrium patens
Pp3c1_6480 Physcomitrium patens
PRCOL_00000121 Prasinoderma coloniale
Prupe.2G154600 Prunus persica
Psat4g151800 Pisum sativum
PSO063G7157 Papaver somniferum
QL08p050652 Quercus lobata
RcHm_v2.0_Chr1g0352261 Rosa chinensis
Rhsim07G0021100 Rhododendron simsii
Sabra02G0121400 Salix brachista
Sabra14G0055300 Salix brachista
SalBow3G2367 Salvia bowleyana
Sc26g0001070 Simmondsia chinensis
Sed0024588 Sechium edule
SEGI_14549 Sequoiadendron giganteum
SEGI_18314 Sequoiadendron giganteum
SEGI_36912 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28870 Striga asiatica
SMO356G0133 Selaginella moellendorffii
Solyc01g091780.4 Solanum lycopersicum
Sopen01g037560 Solanum pennellii
Sp5g02280 Schrenkiella parvula
TAR375G0873 Trochodendron aralioides
THA.LOC104827683 Tarenaya hassleriana
Thecc.01G368600 Theobroma cacao
Thhalv10006098m.g Eutrema salsugineum
TPR.G17586 Trifolium pratense
TWI59G1449 Tripterygium wilfordii
unitig_22.g5367 Utricularia gibba
vmacro13338 Vaccinium macrocarpon
VMungo0331G0376 Vigna mungo
Zm00001eb001200 Zea mays

User provided reference genes

Program Settings