Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p32190 Brassica napus
Aa31LG8G9430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.32 Anthoceros agrestis
Actinidia08458 Actinidia chinensis
Actinidia18525 Actinidia chinensis
AL5G37040 Arabidopsis lyrata
Aqoxy5G00384 Aquilegia oxysepala
Aqoxy7G01065 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G28WYQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IQUH92 Arachis hypogaea
AT3G55760 Arabidopsis thaliana
ATR0665G293 Amborella trichopoda
Atru.chr4.2321 Acer truncatum
AUR62039163 Chenopodium quinoa
BcaB04g20485 Brassica carinata
BcaB06g27077 Brassica carinata
BcaB07g33591 Brassica carinata
BcaC09g49223 Brassica carinata
BolC1t04076H Brassica oleracea
BraA01t03345Z Brassica rapa
C01p41220 Brassica napus
CAN.G231.21 Capsicum annuum
CANSAT78G1649 Cannabis sativa
CARHR165870 Cardamine hirsuta
Carub.0005s2255 Capsella rubella
Ca_23527_v3 Cicer arietinum L.
CBR_g19275 Chara braunii
Cc03_g04450 Coffea canephora
CDE10G0086 Ceratophyllum demersum
CDE10G0319 Ceratophyllum demersum
Cfa008415 Carpinus fangiana
Ciclev10004554m.g Citrus clementina
CiPaw.01G193800 Carya illinoinensis
ClCG06G006550 Citrullus lanatus
COL.COLO4_13180 Corchorus olitorius
Cpa.g.sc44.136 Carica papaya
CsaV3_2G013340 Cucumis sativus L.
CSS0014472 Camellia sinensis var. sinensis
CSS0017539 Camellia sinensis var. sinensis
DCAR_002362 Daucus carota
DCAR_023811 Daucus carota
DCAR_024183 Daucus carota
DCAR_027254 Daucus carota
Dinv14061 Davidia involucrata
Duzib151G0014 Durio zibethinus
Duzib212G0108 Durio zibethinus
EL10As20g24207 Beta vulgaris
Eucgr.H03403 Eucalyptus grandis
FAN12G4074 Fragaria x ananassa
FAN17G0812 Fragaria x ananassa
FAN22G0464 Fragaria x ananassa
FvH4_4g01790 Fragaria vesca
Glyma.02G001900 Glycine max
Gohir.A09G220300 Gossypium hirsutum
Gohir.D09G222500 Gossypium hirsutum
Gorai.006G243700 Gossypium raimondii
GSVIVG01018073001 Vitis vinifera
HanXRQChr12g0380371 Helianthus annuus
Haze_11252 Corylus avellana
Hma1.2p1_1095F.1_g256580 Hydrangea macrophylla
HPP92_007968 Vanilla planifolia
Hund20068 Selenicereus undatus
Lalb_Chr03g0037581 Lupinus albus
Lj6A648T26 Lonicera japonica
Lj6C649T7 Lonicera japonica
Lj6g0022017 Lotus japonicus
Lsat_1_v5_gn_5_65540 Lactuca sativa
Manes.03G171500 Manihot esculenta
Manes.15G034000 Manihot esculenta
Mapoly0053s0066 Marchantia polymorpha
MD13G1202100 Malus domestica
MD16G1202300 Malus domestica
Medtr1g041275 Medicago truncatula
MELO3C014278.2 Cucumis melo
Migut.G00392 Erythranthe guttata
Migut.G00407 Erythranthe guttata
MSTRG.4074 Avicennia marina
Nitab4.5_0000321g0290 Nicotiana tabacum
Nitab4.5_0002446g0090 Nicotiana tabacum
Nn1g02503 Nelumbo nucifera
Nn3g19455 Nelumbo nucifera
Oeu009116.2 Olea europaea
Oeu064236.1 Olea europaea
Os11g0586300 Oryza sativa ssp. japonica
Peaxi162Scf00131g00510 Petunia axillaris
PGR004G1989 Punica granatum
PGSC0003DMG400016314 Solanum tuberosum
Phvul.007G279100 Phaseolus vulgaris
Potri.008G159500 Populus trichocarpa
Pp3c25_530 Physcomitrium patens
Prupe.1G023800 Prunus persica
Psat6g103160 Pisum sativum
PSO541G5254 Papaver somniferum
PSO675G2091 Papaver somniferum
QL06p000554 Quercus lobata
RcHm_v2.0_Chr4g0388691 Rosa chinensis
RcHm_v2.0_Chr4g0388701 Rosa chinensis
RcHm_v2.0_Chr4g0388821 Rosa chinensis
Rhsim02G0030900 Rhododendron simsii
Rhsim02G0031200 Rhododendron simsii
Sabra08G0121600 Salix brachista
SalBow2G0732 Salvia bowleyana
Sc15g0003230 Simmondsia chinensis
Sed0014630 Sechium edule
Sed0027736 Sechium edule
SEGI_22971 Sequoiadendron giganteum
SEGI_38745 Sequoiadendron giganteum
SGA_v2.0_scaffold101G29748 Striga asiatica
SMO351G0143 Selaginella moellendorffii
Solyc06g053920.4 Solanum lycopersicum
Sopen06g019080 Solanum pennellii
Sp3g20620 Schrenkiella parvula
TAR362G0995 Trochodendron aralioides
TAR549G0005 Trochodendron aralioides
TAR549G0008 Trochodendron aralioides
TAR633G2087 Trochodendron aralioides
Thecc.04G241400 Theobroma cacao
Thhalv10020381m.g Eutrema salsugineum
TPR.G32777 Trifolium pratense
TWI09G0629 Tripterygium wilfordii
unitig_749.g14084 Utricularia gibba
vmacro15391 Vaccinium macrocarpon
VMungo0720G0393 Vigna mungo
Zm00001eb200610 Zea mays

User provided reference genes

Program Settings