Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04800 Brassica napus
Aa31sc146G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1571 Anthoceros agrestis
Actinidia06612 Actinidia chinensis
Ah.02g121650 Amaranthus hybridus
Ah.02g121660 Amaranthus hybridus
AL7G18080 Arabidopsis lyrata
Aqoxy5G02258 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JNKP0R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YLDT1P Arachis hypogaea
AT4G33470 Arabidopsis thaliana
ATR0709G070 Amborella trichopoda
Atru.chr4.871 Acer truncatum
AUR62003584 Chenopodium quinoa
AUR62017897 Chenopodium quinoa
BcaC09g52163 Brassica carinata
BolC1t00500H Brassica oleracea
BraA01t00463Z Brassica rapa
C01p05210 Brassica napus
CAN.G102.6 Capsicum annuum
CANSAT56G3272 Cannabis sativa
CARHR241550 Cardamine hirsuta
Carub.0007s0700 Capsella rubella
Ca_17631_v3 Cicer arietinum L.
CBR_g34011 Chara braunii
Cc07_g18770 Coffea canephora
Ciclev10001184m.g Citrus clementina
CiPaw.03G120300 Carya illinoinensis
ClCG01G015340 Citrullus lanatus
COL.COLO4_35764 Corchorus olitorius
Cpa.g.sc42.168 Carica papaya
Cre02.g116950 Chlamydomonas reinhardtii
Cre06.g290400 Chlamydomonas reinhardtii
CsaV3_6G041560 Cucumis sativus L.
CSS0018152 Camellia sinensis var. sinensis
CSS0034667 Camellia sinensis var. sinensis
CSS0040168 Camellia sinensis var. sinensis
DCAR_001205 Daucus carota
Dinv24384 Davidia involucrata
Duzib264G0077 Durio zibethinus
Duzib264G1089 Durio zibethinus
ECA240G4797 Erigeron canadensis
EL10Ac6g15291 Beta vulgaris
Eucgr.J01293 Eucalyptus grandis
FAN19G0829 Fragaria x ananassa
FAN19G0875 Fragaria x ananassa
FAN26G1915 Fragaria x ananassa
FAN28G2289 Fragaria x ananassa
FvH4_1g24510 Fragaria vesca
Glyma.05G192600 Glycine max
Gohir.A05G383400 Gossypium hirsutum
Gohir.D04G031900 Gossypium hirsutum
Gorai.012G036200 Gossypium raimondii
GSVIVG01026467001 Vitis vinifera
HanXRQChr14g0433381 Helianthus annuus
Haze_25261 Corylus avellana
Hma1.2p1_1113F.1_g258680 Hydrangea macrophylla
HPP92_005669 Vanilla planifolia
Lalb_Chr16g0392561 Lupinus albus
Lj1g0009434 Lotus japonicus
Lj4C835T2 Lonicera japonica
Lj4g0005909 Lotus japonicus
Lj4g0011583 Lotus japonicus
Lsat_1_v5_gn_2_37440 Lactuca sativa
Manes.12G156900 Manihot esculenta
Mapoly0029s0117 Marchantia polymorpha
MBI03_g20845_MAGBIO Magnolia biondii
MCO10G368 Micromonas commoda
MD01G1005700 Malus domestica
Medtr8g093800 Medicago truncatula
MELO3C008064.2 Cucumis melo
Migut.H00692 Erythranthe guttata
Nitab4.5_0000504g0020 Nicotiana tabacum
Nitab4.5_0003575g0030 Nicotiana tabacum
Nn5g28508 Nelumbo nucifera
Oeu058292.1 Olea europaea
Os12g0182700 Oryza sativa ssp. japonica
Peaxi162Scf00119g00930 Petunia axillaris
Peaxi162Scf00119g00944 Petunia axillaris
PGR102G3106 Punica granatum
PGSC0003DMG401005535 Solanum tuberosum
Phvul.002G273200 Phaseolus vulgaris
Potri.005G064200 Populus trichocarpa
Pp3c21_17500 Physcomitrium patens
PRCOL_00001278 Prasinoderma coloniale
Prupe.4G272300 Prunus persica
Psat7g045760 Pisum sativum
PSO063G1915 Papaver somniferum
PSO170G2800 Papaver somniferum
QL10p043125 Quercus lobata
QL10p043184 Quercus lobata
QL10p043267 Quercus lobata
QL10p043286 Quercus lobata
QL10p043345 Quercus lobata
RcHm_v2.0_Chr1g0346631 Rosa chinensis
RcHm_v2.0_Chr2g0121851 Rosa chinensis
RcHm_v2.0_Chr6g0252021 Rosa chinensis
RcHm_v2.0_Chr6g0304611 Rosa chinensis
Rhsim10G0133100 Rhododendron simsii
Sabra05G0053500 Salix brachista
SalBow1G2034 Salvia bowleyana
Sc03g0005030 Simmondsia chinensis
Sc03g0005040 Simmondsia chinensis
Sc19g0005860 Simmondsia chinensis
Sed0008132 Sechium edule
SEGI_25913 Sequoiadendron giganteum
SGA_v2.0_scaffold370G50105 Striga asiatica
SMO232G0082 Selaginella moellendorffii
SMO241G0020 Selaginella moellendorffii
SMO241G0029 Selaginella moellendorffii
Solyc01g009120.3 Solanum lycopersicum
Sopen01g004600 Solanum pennellii
Sp7g31180 Schrenkiella parvula
TAR628G1683 Trochodendron aralioides
THA.LOC104819490 Tarenaya hassleriana
Thecc.01G134400 Theobroma cacao
Thhalv10025266m.g Eutrema salsugineum
TPR.G37345 Trifolium pratense
TWI75G1875 Tripterygium wilfordii
TWI79G0588 Tripterygium wilfordii
unitig_899.g14678 Utricularia gibba
vmacro12791 Vaccinium macrocarpon
VMungo0251G0496 Vigna mungo
Zm00001eb148900 Zea mays

User provided reference genes

Program Settings