Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48230 Brassica napus
Aa31LG8G5750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis
Actinidia20688 Actinidia chinensis
Actinidia21568 Actinidia chinensis
Ah.16g101020 Amaranthus hybridus
AL5G40550 Arabidopsis lyrata
AL8G12830 Arabidopsis lyrata
AL8G18110 Arabidopsis lyrata
Aqoxy1G00188 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea
AT5G42850 Arabidopsis thaliana
ATR0605G011 Amborella trichopoda
Atru.chr11.2670 Acer truncatum
Atru.chr11.2672 Acer truncatum
AUR62009476 Chenopodium quinoa
AUR62009477 Chenopodium quinoa
AUR62023154 Chenopodium quinoa
AUR62023155 Chenopodium quinoa
BcaC02g10802 Brassica carinata
BcaC06g31744 Brassica carinata
BolC4t23999H Brassica oleracea
BraA06t27691Z Brassica rapa
C04p24990 Brassica napus
CAN.G1076.12 Capsicum annuum
CAN.G1110.8 Capsicum annuum
CAN.G290.22 Capsicum annuum
CAN.G37.7 Capsicum annuum
CANSAT01G1452 Cannabis sativa
CARHR181310 Cardamine hirsuta
Carub.0008s0607 Capsella rubella
Ca_27853_v3 Cicer arietinum L.
CBR_g40140 Chara braunii
Cc02_g27340 Coffea canephora
Cc02_g27370 Coffea canephora
CDE07G0477 Ceratophyllum demersum
Cfa010728 Carpinus fangiana
Ciclev10033058m.g Citrus clementina
CiPaw.12G060500 Carya illinoinensis
COL.COLO4_23906 Corchorus olitorius
Cre07.g315100 Chlamydomonas reinhardtii
Cre12.g549500 Chlamydomonas reinhardtii
CsaV3_3G032370 Cucumis sativus L.
CSS0016496 Camellia sinensis var. sinensis
CSS0031684 Camellia sinensis var. sinensis
DCAR_006304 Daucus carota
Dinv43911 Davidia involucrata
Duzib133G0004 Durio zibethinus
ECA248G1263 Erigeron canadensis
EL10Ac2g04436 Beta vulgaris
Eucgr.G03402 Eucalyptus grandis
FAN03G1462 Fragaria x ananassa
FAN06G2479 Fragaria x ananassa
FAN10G1890 Fragaria x ananassa
FvH4_7g00510 Fragaria vesca
Glyma.08G151500 Glycine max
Glyma.08G152300 Glycine max
Glyma.15G271700 Glycine max
Gohir.A09G099700 Gossypium hirsutum
Gohir.D09G099100 Gossypium hirsutum
Gorai.006G116100 Gossypium raimondii
GSVIVG01032037001 Vitis vinifera
HanXRQChr01g0018511 Helianthus annuus
Haze_03245 Corylus avellana
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla
HPP92_018950 Vanilla planifolia
Lalb_Chr25g0283271 Lupinus albus
Lj3g0007274 Lotus japonicus
Lsat_1_v5_gn_8_7620 Lactuca sativa
Manes.10G148300 Manihot esculenta
Mapoly0028s0130 Marchantia polymorpha
MBI01_g15755_MAGBIO Magnolia biondii
MD00G1052400 Malus domestica
MD01G1062200 Malus domestica
MD02G1317000 Malus domestica
MD07G1004900 Malus domestica
Medtr3g027090 Medicago truncatula
Migut.N01489 Erythranthe guttata
MSTRG.28085 Avicennia marina
Nitab4.5_0002012g0020 Nicotiana tabacum
Nitab4.5_0004606g0020 Nicotiana tabacum
Nn2g15582 Nelumbo nucifera
Nn7g36056 Nelumbo nucifera
Oeu013593.2 Olea europaea
Oeu064276.1 Olea europaea
Os06g0320000 Oryza sativa ssp. japonica
Peaxi162Scf00045g00327 Petunia axillaris
PGR042G3140 Punica granatum
PGSC0003DMG400026375 Solanum tuberosum
Phvul.005G037200 Phaseolus vulgaris
Phvul.005G038700 Phaseolus vulgaris
Potri.001G225500 Populus trichocarpa
Pp3c1_3150 Physcomitrium patens
Prupe.2G007200 Prunus persica
Psat5g207000 Pisum sativum
PSO339G0425 Papaver somniferum
PSO384G2221 Papaver somniferum
QL04p004786 Quercus lobata
RcHm_v2.0_Chr1g0314301 Rosa chinensis
Rhsim07G0053100 Rhododendron simsii
Sabra16G0134100 Salix brachista
SalBow5G2051 Salvia bowleyana
Sc14g0005190 Simmondsia chinensis
Sed0019847 Sechium edule
SEGI_10267 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05439 Striga asiatica
SGA_v2.0_scaffold4G02243 Striga asiatica
SMO244G0064 Selaginella moellendorffii
Solyc10g037980.2 Solanum lycopersicum
Sopen10g011600 Solanum pennellii
Sp2g07550 Schrenkiella parvula
TAR633G2790 Trochodendron aralioides
THA.LOC104823024 Tarenaya hassleriana
Thecc.01G414800 Theobroma cacao
Thhalv10003289m.g Eutrema salsugineum
TPR.G12183 Trifolium pratense
TWI09G1159 Tripterygium wilfordii
unitig_22.g5766 Utricularia gibba
vmacro13638 Vaccinium macrocarpon
VMungo1080G0430 Vigna mungo
VMungo1080G0583 Vigna mungo
Zm00001eb381670 Zea mays
Zm00001eb381710 Zea mays

User provided reference genes

Program Settings