Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p29590 Brassica napus
A05p07410 Brassica napus
Aa31LG5G8880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2793 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.281 Anthoceros agrestis
Actinidia09395 Actinidia chinensis
Ah.09g227470 Amaranthus hybridus
AL4G20130 Arabidopsis lyrata
Aqoxy7G01922 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DI6VX2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0ENSR Arachis hypogaea
AT2G26900 Arabidopsis thaliana
ATR0083G040 Amborella trichopoda
Atru.chr7.1273 Acer truncatum
AUR62001469 Chenopodium quinoa
AUR62011044 Chenopodium quinoa
AUR62033421 Chenopodium quinoa
BcaB02g09151 Brassica carinata
BcaC02g07446 Brassica carinata
BolC4t22476H Brassica oleracea
BolC4t28190H Brassica oleracea
BraA04t18424Z Brassica rapa
BraA05t19707Z Brassica rapa
C04p08880 Brassica napus
C04p66880 Brassica napus
CAN.G1101.3 Capsicum annuum
CANSAT56G4068 Cannabis sativa
CARHR119060 Cardamine hirsuta
Carub.0004s0740 Capsella rubella
Ca_21720_v3 Cicer arietinum L.
Cc06_g09180 Coffea canephora
CDE01G0021 Ceratophyllum demersum
Cfa003304 Carpinus fangiana
Ciclev10008416m.g Citrus clementina
CiPaw.03G236900 Carya illinoinensis
ClCG06G010520 Citrullus lanatus
COL.COLO4_34960 Corchorus olitorius
Cpa.g.sc1720.1 Carica papaya
Cre12.g532500 Chlamydomonas reinhardtii
CsaV3_1G030990 Cucumis sativus L.
CSS0024707 Camellia sinensis var. sinensis
DCAR_020847 Daucus carota
Dinv41560 Davidia involucrata
Duzib150G0624 Durio zibethinus
Duzib187G0454 Durio zibethinus
Duzib187G1914 Durio zibethinus
ECA234G0075 Erigeron canadensis
EL10Ac8g18562 Beta vulgaris
Eucgr.C01098 Eucalyptus grandis
FAN19G2692 Fragaria x ananassa
FAN26G1677 Fragaria x ananassa
FAN28G0154 Fragaria x ananassa
FvH4_1g04160 Fragaria vesca
Glyma.05G011700 Glycine max
Glyma.17G119900 Glycine max
Gohir.A06G059400 Gossypium hirsutum
Gohir.A13G197200 Gossypium hirsutum
Gohir.D06G057600 Gossypium hirsutum
Gohir.D13G202500 Gossypium hirsutum
Gorai.010G067700 Gossypium raimondii
Gorai.013G231400 Gossypium raimondii
GSVIVG01015459001 Vitis vinifera
HanXRQChr09g0238611 Helianthus annuus
HanXRQChr09g0243901 Helianthus annuus
Haze_25657 Corylus avellana
Hma1.2p1_0018F.1_g013040 Hydrangea macrophylla
HPP92_021804 Vanilla planifolia
Hund09168 Selenicereus undatus
Lalb_Chr07g0178681 Lupinus albus
Lalb_Chr12g0197651 Lupinus albus
Lj4g0024728 Lotus japonicus
Lj7A638T62 Lonicera japonica
Lsat_1_v5_gn_5_98501 Lactuca sativa
Manes.16G063700 Manihot esculenta
Mapoly0030s0051 Marchantia polymorpha
MBI01_g45790_MAGBIO Magnolia biondii
MCO09G631 Micromonas commoda
MD02G1040100 Malus domestica
MD15G1145000 Malus domestica
Medtr4g113090 Medicago truncatula
MELO3C025304.2 Cucumis melo
Migut.A00837 Erythranthe guttata
MSTRG.12057 Avicennia marina
MSTRG.25550 Avicennia marina
Nitab4.5_0000432g0050 Nicotiana tabacum
Nitab4.5_0005122g0040 Nicotiana tabacum
Nn2g11861 Nelumbo nucifera
Nn8g39317 Nelumbo nucifera
Oeu018253.4 Olea europaea
Oeu048663.1 Olea europaea
Os01g0645200 Oryza sativa ssp. japonica
Peaxi162Scf00225g00623 Petunia axillaris
PGR142G1792 Punica granatum
PGSC0003DMG400001256 Solanum tuberosum
Phvul.003G159600 Phaseolus vulgaris
Potri.018G074400 Populus trichocarpa
Pp3c5_7360 Physcomitrium patens
Pp3c6_19720 Physcomitrium patens
PRCOL_00000738 Prasinoderma coloniale
Prupe.7G235600 Prunus persica
Psat0s944g0200 Pisum sativum
PSO017G6369 Papaver somniferum
PSO170G2819 Papaver somniferum
QL02p086503 Quercus lobata
RcHm_v2.0_Chr2g0089661 Rosa chinensis
Rhsim01G0089900 Rhododendron simsii
Sabra18G0063400 Salix brachista
SalBow6G4468 Salvia bowleyana
Sc18g0000940 Simmondsia chinensis
Sed0016281 Sechium edule
SEGI_02510 Sequoiadendron giganteum
SEGI_13894 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32811 Striga asiatica
SMO143G0190 Selaginella moellendorffii
Solyc05g017950.3 Solanum lycopersicum
Sopen05g014570 Solanum pennellii
Sp4g21150 Schrenkiella parvula
TAR625G0148 Trochodendron aralioides
THA.LOC104815245 Tarenaya hassleriana
THA.LOC104826532 Tarenaya hassleriana
Thecc.09G117500 Theobroma cacao
Thhalv10016729m.g Eutrema salsugineum
TPR.G26797 Trifolium pratense
TWI32G0927 Tripterygium wilfordii
unitig_22.g5484 Utricularia gibba
vmacro20679 Vaccinium macrocarpon
VMungo1215G2965 Vigna mungo

User provided reference genes

Program Settings