Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG2G4510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2217 Anthoceros agrestis
Actinidia06068 Actinidia chinensis
Actinidia23575 Actinidia chinensis
Ah.12g065370 Amaranthus hybridus
AL5G18340 Arabidopsis lyrata
Aqoxy3G03264 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.57V2RC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9ZMQ3R Arachis hypogaea
AT3G28700 Arabidopsis thaliana
ATR1120G150 Amborella trichopoda
Atru.chr8.1915 Acer truncatum
AUR62031644 Chenopodium quinoa
AUR62038879 Chenopodium quinoa
BcaC02g09250 Brassica carinata
BcaC06g30901 Brassica carinata
BcaC06g33634 Brassica carinata
BolC4t25631H Brassica oleracea
BolC7t44281H Brassica oleracea
BolC8t50105H Brassica oleracea
BolC9t53325H Brassica oleracea
C04p40510 Brassica napus
C05p44890 Brassica napus
C08p24890 Brassica napus
C08p31240 Brassica napus
C09p03940 Brassica napus
CAN.G206.108 Capsicum annuum
CANSAT64G2224 Cannabis sativa
CARHR286600 Cardamine hirsuta
Carub.0005s0723 Capsella rubella
Ca_19010_v3 Cicer arietinum L.
Ca_20945_v3 Cicer arietinum L.
CBR_g40650 Chara braunii
Cc01_g00810 Coffea canephora
CDE05G2812 Ceratophyllum demersum
Cfa007507 Carpinus fangiana
Cfa026330 Carpinus fangiana
Ciclev10011611m.g Citrus clementina
CiPaw.03G030400 Carya illinoinensis
ClCG09G018410 Citrullus lanatus
COL.COLO4_25201 Corchorus olitorius
Cre02.g096400 Chlamydomonas reinhardtii
CsaV3_5G037870 Cucumis sativus L.
CSS0006137 Camellia sinensis var. sinensis
CSS0036057 Camellia sinensis var. sinensis
DCAR_006720 Daucus carota
Dinv33716 Davidia involucrata
Dinv34987 Davidia involucrata
Dinv34989 Davidia involucrata
ECA232G0063 Erigeron canadensis
ECA232G3528 Erigeron canadensis
EL10Ac2g03435 Beta vulgaris
Eucgr.J02136 Eucalyptus grandis
FAN02G2179 Fragaria x ananassa
FAN05G4054 Fragaria x ananassa
FAN14G4702 Fragaria x ananassa
FvH4_6g49351 Fragaria vesca
Glyma.11G099200 Glycine max
Gohir.A05G364200 Gossypium hirsutum
Gohir.D04G050500 Gossypium hirsutum
Gorai.012G056000 Gossypium raimondii
GSVIVG01032604001 Vitis vinifera
HanXRQChr09g0265611 Helianthus annuus
Haze_14586 Corylus avellana
Hma1.2p1_1232F.1_g268880 Hydrangea macrophylla
Hma1.2p1_1232F.1_g268890 Hydrangea macrophylla
HPP92_003669 Vanilla planifolia
HPP92_022922 Vanilla planifolia
HPP92_022934 Vanilla planifolia
HPP92_022944 Vanilla planifolia
Hund13245 Selenicereus undatus
Lalb_Chr19g0139461 Lupinus albus
Lj3g0011182 Lotus japonicus
Lj7A401T79 Lonicera japonica
Lsat_1_v5_gn_4_179920 Lactuca sativa
Manes.17G020800 Manihot esculenta
Mapoly0027s0012 Marchantia polymorpha
MBI15_g37231_MAGBIO Magnolia biondii
MCO09G443 Micromonas commoda
MD09G1045900 Malus domestica
MD17G1046800 Malus domestica
Medtr4g075200 Medicago truncatula
MELO3C021973.2 Cucumis melo
Migut.K01334 Erythranthe guttata
Migut.K01335 Erythranthe guttata
MSTRG.15488 Avicennia marina
Nitab4.5_0000564g0320 Nicotiana tabacum
Nitab4.5_0002265g0270 Nicotiana tabacum
Nn3g17123 Nelumbo nucifera
Oeu033340.1 Olea europaea
Oeu060916.1 Olea europaea
Os01g0588800 Oryza sativa ssp. japonica
Peaxi162Scf00129g00533 Petunia axillaris
PGR083G0481 Punica granatum
PGSC0003DMG400001411 Solanum tuberosum
Phvul.011G027550 Phaseolus vulgaris
Potri.017G077000 Populus trichocarpa
Pp3c8_16780 Physcomitrium patens
Prupe.3G272300 Prunus persica
Psat7g177520 Pisum sativum
PSO591G0496 Papaver somniferum
PSO832G0234 Papaver somniferum
QL02p080348 Quercus lobata
RcHm_v2.0_Chr2g0169211 Rosa chinensis
RhsimUnG0055000 Rhododendron simsii
Sabra17G0069200 Salix brachista
SalBow1G8169 Salvia bowleyana
Sc10g0003830 Simmondsia chinensis
Sed0013706 Sechium edule
Sed0024340 Sechium edule
SEGI_03019 Sequoiadendron giganteum
SGA_v2.0_scaffold30G12523 Striga asiatica
SHI22231 Sapria himalayana
SMO200G0063 Selaginella moellendorffii
Solyc02g087640.3 Solanum lycopersicum
Sopen02g032390 Solanum pennellii
Sp2g17340 Schrenkiella parvula
TAR371G1229 Trochodendron aralioides
THA.LOC104823928 Tarenaya hassleriana
Thecc.04G074100 Theobroma cacao
Thhalv10004119m.g Eutrema salsugineum
TPR.G17186 Trifolium pratense
TWI34G1416 Tripterygium wilfordii
unitig_747.g21836 Utricularia gibba
vmacro05739 Vaccinium macrocarpon
VMungo1127G2029 Vigna mungo
Zm00001eb357440 Zea mays

User provided reference genes

Program Settings