Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16040 Brassica napus
Aa31LG4G9900 Aethionema arabicum
Ah.11g051190 Amaranthus hybridus
Aqoxy5G03742 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.32D49K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3TKR16 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.517WRM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5EQE0P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S747I7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XL5ZPG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YY50VQ Arachis hypogaea
AT4G24710 Arabidopsis thaliana
ATR0824G215 Amborella trichopoda
Atru.chr9.2581 Acer truncatum
AUR62008142 Chenopodium quinoa
AUR62028724 Chenopodium quinoa
BcaC06g32866 Brassica carinata
BcaC09g50838 Brassica carinata
BcaNung07359 Brassica carinata
BolC1t01930H Brassica oleracea
BraA01t01539Z Brassica rapa
C01p20030 Brassica napus
CAN.G648.11 Capsicum annuum
CANSAT80G1924 Cannabis sativa
CARHR232090 Cardamine hirsuta
Carub.0007s1635 Capsella rubella
Ca_16128_v3 Cicer arietinum L.
Ca_16138_v3 Cicer arietinum L.
Ca_30305_v3 Cicer arietinum L.
CBR_g39421 Chara braunii
Cc04_g11480 Coffea canephora
CDE09G0716 Ceratophyllum demersum
Cfa019222 Carpinus fangiana
Ciclev10020078m.g Citrus clementina
CiPaw.11G019400 Carya illinoinensis
ClCG03G003010 Citrullus lanatus
COL.COLO4_36757 Corchorus olitorius
Cpa.g.sc159.17 Carica papaya
Cre02.g117150 Chlamydomonas reinhardtii
CsaV3_1G008850 Cucumis sativus L.
CSS0022134 Camellia sinensis var. sinensis
DCAR_021592 Daucus carota
Dinv38524 Davidia involucrata
ECA232G4716 Erigeron canadensis
EL10Ac5g10654 Beta vulgaris
Eucgr.B00217 Eucalyptus grandis
FAN08G2144 Fragaria x ananassa
FAN13G2576 Fragaria x ananassa
FAN18G2337 Fragaria x ananassa
FvH4_5g06320 Fragaria vesca
Glyma.04G188400 Glycine max
Glyma.06G177400 Glycine max
Gohir.A03G057200 Gossypium hirsutum
Gohir.D03G109100 Gossypium hirsutum
Gorai.003G115100 Gossypium raimondii
GSVIVG01007643001 Vitis vinifera
HanXRQChr03g0075641 Helianthus annuus
HanXRQChr10g0296031 Helianthus annuus
Haze_07590 Corylus avellana
Hma1.2p1_0046F.1_g027160 Hydrangea macrophylla
HPP92_008110 Vanilla planifolia
HPP92_008121 Vanilla planifolia
Hund02788 Selenicereus undatus
Lalb_Chr23g0273351 Lupinus albus
Lj1g0021386 Lotus japonicus
Lj5C130T5 Lonicera japonica
Lsat_1_v5_gn_4_77340 Lactuca sativa
Manes.06G110500 Manihot esculenta
Mapoly0084s0055 Marchantia polymorpha
MBI06_g16065_MAGBIO Magnolia biondii
MCO05G067 Micromonas commoda
MD06G1165600 Malus domestica
MD14G1171200 Malus domestica
Medtr3g076930 Medicago truncatula
MELO3C002299.2 Cucumis melo
Migut.O00160 Erythranthe guttata
MSTRG.11496 Avicennia marina
Nitab4.5_0000025g0360 Nicotiana tabacum
Nitab4.5_0000025g0370 Nicotiana tabacum
Nitab4.5_0001566g0050 Nicotiana tabacum
Nn4g22589 Nelumbo nucifera
Oeu040860.1 Olea europaea
Os04g0479000 Oryza sativa ssp. japonica
Peaxi162Scf00801g00216 Petunia axillaris
Peaxi162Scf00801g00218 Petunia axillaris
Peaxi162Scf00801g00219 Petunia axillaris
PGR083G0853 Punica granatum
Phvul.009G173800 Phaseolus vulgaris
Potri.012G086400 Populus trichocarpa
Potri.015G084900 Populus trichocarpa
PRCOL_00006353 Prasinoderma coloniale
Prupe.5G165300 Prunus persica
Psat5g118240 Pisum sativum
PSO063G1215 Papaver somniferum
PSO063G4271 Papaver somniferum
PSO063G5100 Papaver somniferum
PSO357G0046 Papaver somniferum
PSO357G0693 Papaver somniferum
PSO700G0237 Papaver somniferum
PSO754G0074 Papaver somniferum
PSO782G2571 Papaver somniferum
QL10p006868 Quercus lobata
RcHm_v2.0_Chr7g0192541 Rosa chinensis
Rhsim08G0178000 Rhododendron simsii
Sabra15G0107900 Salix brachista
SalBow5G0732 Salvia bowleyana
SalBow5G2378 Salvia bowleyana
Sc12g0004970 Simmondsia chinensis
Sed0008195 Sechium edule
SEGI_21694 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10798 Striga asiatica
SHI17264 Sapria himalayana
Solyc12g076320.2 Solanum lycopersicum
Solyc12g076340.1 Solanum lycopersicum
Solyc12g076350.2 Solanum lycopersicum
Sopen12g027590 Solanum pennellii
Sp7g22690 Schrenkiella parvula
TAR371G0588 Trochodendron aralioides
THA.LOC104800398 Tarenaya hassleriana
THA.LOC104824986 Tarenaya hassleriana
Thecc.03G026100 Theobroma cacao
Thhalv10025089m.g Eutrema salsugineum
TPR.G25676 Trifolium pratense
TWI14G0288 Tripterygium wilfordii
unitig_26.g8808 Utricularia gibba
vmacro19294 Vaccinium macrocarpon
VMungo1309G1487 Vigna mungo
Zm00001eb424890 Zea mays

User provided reference genes

Program Settings