Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p18350 Brassica napus
Aa31LG1G13100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.538 Anthoceros agrestis
Actinidia07239 Actinidia chinensis
Actinidia07240 Actinidia chinensis
Actinidia24207 Actinidia chinensis
AL6G33490 Arabidopsis lyrata
Aqoxy4G02800 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.350PIT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3B7Z7B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H8SP9Z Arachis hypogaea
AT5G22470 Arabidopsis thaliana
ATR0081G030 Amborella trichopoda
ATR0081G068 Amborella trichopoda
Atru.chr3.3289 Acer truncatum
AUR62009776 Chenopodium quinoa
AUR62039221 Chenopodium quinoa
BcaB08g36428 Brassica carinata
BcaC04g18655 Brassica carinata
BcaC04g19576 Brassica carinata
BolC9t58283H Brassica oleracea
BraA10t43915Z Brassica rapa
C09p54120 Brassica napus
CAN.G386.6 Capsicum annuum
CAN.G386.7 Capsicum annuum
CAN.G942.10 Capsicum annuum
CANSAT54G0007 Cannabis sativa
CARHR191060 Cardamine hirsuta
Carub.0006s2021 Capsella rubella
Ca_19400_v3 Cicer arietinum L.
CBR_g78871 Chara braunii
Cc00_g22450 Coffea canephora
Cc01_g09350 Coffea canephora
Cc01_g09360 Coffea canephora
CDE02G4747 Ceratophyllum demersum
Ciclev10027891m.g Citrus clementina
CiPaw.13G137200 Carya illinoinensis
ClCG02G022180 Citrullus lanatus
COL.COLO4_19902 Corchorus olitorius
Cpa.g.sc32.96 Carica papaya
CsaV3_6G015040 Cucumis sativus L.
CSS0006332 Camellia sinensis var. sinensis
CSS0038139 Camellia sinensis var. sinensis
DCAR_012185 Daucus carota
DCAR_012186 Daucus carota
Dinv29466 Davidia involucrata
ECA233G0362 Erigeron canadensis
EL10Ac2g02979 Beta vulgaris
EL10Ac2g03348 Beta vulgaris
EL10Ac7g15809 Beta vulgaris
EL10Ac7g17758 Beta vulgaris
EL10Ac9g22563 Beta vulgaris
Eucgr.J00484 Eucalyptus grandis
FAN11G3386 Fragaria x ananassa
FAN16G1878 Fragaria x ananassa
FAN21G2771 Fragaria x ananassa
FAN25G3414 Fragaria x ananassa
FvH4_3g24670 Fragaria vesca
Glyma.11G184100 Glycine max
Glyma.12G088300 Glycine max
Gohir.A05G081400 Gossypium hirsutum
Gohir.D05G084400 Gossypium hirsutum
Gorai.009G086300 Gossypium raimondii
GSVIVG01036149001 Vitis vinifera
HanXRQChr13g0397241 Helianthus annuus
Haze_23395 Corylus avellana
Hma1.2p1_0578F.1_g182380 Hydrangea macrophylla
Hund20878 Selenicereus undatus
Lalb_Chr19g0136551 Lupinus albus
Lalb_Chr19g0136561 Lupinus albus
Lj2A980T11 Lonicera japonica
Lj3g0013381 Lotus japonicus
Lsat_1_v5_gn_6_40440 Lactuca sativa
Manes.11G160900 Manihot esculenta
MD03G1142500 Malus domestica
MD11G1163000 Malus domestica
Medtr4g053530 Medicago truncatula
MELO3C021418.2 Cucumis melo
Migut.D02355 Erythranthe guttata
Nitab4.5_0000227g0200 Nicotiana tabacum
Nitab4.5_0000234g0160 Nicotiana tabacum
Nitab4.5_0002914g0020 Nicotiana tabacum
Nitab4.5_0017202g0010 Nicotiana tabacum
Nn2g14127 Nelumbo nucifera
Nn5g28529 Nelumbo nucifera
Oeu002382.1 Olea europaea
Os02g0530600 Oryza sativa ssp. japonica
Peaxi162Scf00757g00223 Petunia axillaris
Peaxi162Scf01281g00019 Petunia axillaris
PGR119G1891 Punica granatum
PGSC0003DMG400007402 Solanum tuberosum
Phvul.011G093100 Phaseolus vulgaris
Potri.004G184100 Populus trichocarpa
Potri.009G143900 Populus trichocarpa
Pp3c1_22640 Physcomitrium patens
Prupe.6G127600 Prunus persica
Psat7g189040 Pisum sativum
PSO339G5873 Papaver somniferum
PSO384G2079 Papaver somniferum
PSO782G4584 Papaver somniferum
QL01p012505 Quercus lobata
QL01p012508 Quercus lobata
QL01p012511 Quercus lobata
RcHm_v2.0_Chr5g0044231 Rosa chinensis
Rhsim13G0110500 Rhododendron simsii
Sabra09G0111600 Salix brachista
Sabra09G0114300 Salix brachista
SalBow6G6699 Salvia bowleyana
Sc12g0004430 Simmondsia chinensis
Sc21g0007170 Simmondsia chinensis
Sed0012598 Sechium edule
SGA_v2.0_scaffold22G09874 Striga asiatica
SMO367G0269 Selaginella moellendorffii
Solyc01g009470.2 Solanum lycopersicum
Solyc11g067250.3 Solanum lycopersicum
Sopen01g005000 Solanum pennellii
Sopen11g026940 Solanum pennellii
Sp6g22780 Schrenkiella parvula
TAR623G0709 Trochodendron aralioides
TAR633G2006 Trochodendron aralioides
THA.LOC104799546 Tarenaya hassleriana
Thecc.09G285700 Theobroma cacao
Thhalv10015477m.g Eutrema salsugineum
TPR.G17213 Trifolium pratense
TWI31G0173 Tripterygium wilfordii
unitig_747.g21947 Utricularia gibba
vmacro03310 Vaccinium macrocarpon
VMungo1127G0024 Vigna mungo
Zm00001eb242720 Zea mays

User provided reference genes

Program Settings