Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p24930 Brassica napus
Aa31csc22G40 Aethionema arabicum
Aa31LG1G6710 Aethionema arabicum
Aa31LG2G6630 Aethionema arabicum
Aa31LG4G12240 Aethionema arabicum
Aa31sc25G40 Aethionema arabicum
Actinidia13681 Actinidia chinensis
Actinidia38400 Actinidia chinensis
AL5G14220 Arabidopsis lyrata
Aqoxy3G03893 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60XZVP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D2MQ0U Arachis hypogaea
AT3G25680 Arabidopsis thaliana
ATR0053G012 Amborella trichopoda
Atru.chr11.1374 Acer truncatum
AUR62002931 Chenopodium quinoa
AUR62007741 Chenopodium quinoa
BcaB07g30634 Brassica carinata
BcaC04g21422 Brassica carinata
BcaC06g31125 Brassica carinata
BolC7t43986H Brassica oleracea
BolC9t56050H Brassica oleracea
BraA09t38081Z Brassica rapa
C09p31960 Brassica napus
CAN.G184.77 Capsicum annuum
CANSAT64G2925 Cannabis sativa
CARHR288540 Cardamine hirsuta
Carub.0005s0350 Capsella rubella
Ca_05686_v3 Cicer arietinum L.
Cc11_g10720 Coffea canephora
CDE10G0618 Ceratophyllum demersum
CDE10G1085 Ceratophyllum demersum
Cfa018644 Carpinus fangiana
Ciclev10031108m.g Citrus clementina
CiPaw.15G002600 Carya illinoinensis
ClCG05G023090 Citrullus lanatus
Cpa.g.c29023.2 Carica papaya
CsaV3_5G033900 Cucumis sativus L.
DCAR_004998 Daucus carota
DCAR_016410 Daucus carota
DCAR_021655 Daucus carota
Dinv05805 Davidia involucrata
Dinv16516 Davidia involucrata
Duzib248G1574 Durio zibethinus
ECA233G2653 Erigeron canadensis
EL10Ac6g14517 Beta vulgaris
Eucgr.G02358 Eucalyptus grandis
FAN07G1361 Fragaria x ananassa
FAN12G2404 Fragaria x ananassa
FAN17G2361 Fragaria x ananassa
FvH4_4g28210 Fragaria vesca
Glyma.01G089500 Glycine max
Glyma.02G101200 Glycine max
Gohir.A12G172000 Gossypium hirsutum
Gohir.D12G174400 Gossypium hirsutum
Gorai.008G187100 Gossypium raimondii
GSVIVG01011967001 Vitis vinifera
HanXRQChr12g0365331 Helianthus annuus
Haze_17425 Corylus avellana
Hma1.2p1_0862F.1_g229850 Hydrangea macrophylla
HPP92_010105 Vanilla planifolia
HPP92_010259 Vanilla planifolia
HPP92_010261 Vanilla planifolia
HPP92_010264 Vanilla planifolia
HPP92_010266 Vanilla planifolia
HPP92_010273 Vanilla planifolia
Hund25106 Selenicereus undatus
Lalb_Chr04g0254971 Lupinus albus
Lalb_Chr17g0341861 Lupinus albus
Lj2g0021982 Lotus japonicus
Lj3C1021T1 Lonicera japonica
Lsat_1_v5_gn_8_37461 Lactuca sativa
Manes.06G073300 Manihot esculenta
Manes.14G096500 Manihot esculenta
MBI16_g23771_MAGBIO Magnolia biondii
MBI16_g33830_MAGBIO Magnolia biondii
MBI16_g46926_MAGBIO Magnolia biondii
MD11G1305600 Malus domestica
MD13G1047900 Malus domestica
MD13G1048000 Malus domestica
MD13G1260100 Malus domestica
MD16G1049600 Malus domestica
Medtr5g053260 Medicago truncatula
MELO3C012208.2 Cucumis melo
Migut.E00290 Erythranthe guttata
MSTRG.13500 Avicennia marina
Nitab4.5_0004705g0030 Nicotiana tabacum
Nitab4.5_0005803g0050 Nicotiana tabacum
Nn4g23699 Nelumbo nucifera
Oeu024102.2 Olea europaea
Oeu044619.4 Olea europaea
Os06g0499000 Oryza sativa ssp. japonica
Peaxi162Scf00367g00735 Petunia axillaris
PGR119G1960 Punica granatum
PGSC0003DMG400000804 Solanum tuberosum
Phvul.003G026000 Phaseolus vulgaris
Potri.010G131000 Populus trichocarpa
Prupe.1G304100 Prunus persica
Psat1g121440 Pisum sativum
Psat2g090640 Pisum sativum
PSO063G3066 Papaver somniferum
PSO782G2384 Papaver somniferum
QL01p001010 Quercus lobata
RcHm_v2.0_Chr4g0435981 Rosa chinensis
Rhsim12G0080800 Rhododendron simsii
Sabra10G0099800 Salix brachista
SalBow1G1081 Salvia bowleyana
SalBow1G2805 Salvia bowleyana
SalBow8G3742 Salvia bowleyana
Sc04g0006800 Simmondsia chinensis
Sc04g0006810 Simmondsia chinensis
SEGI_16530 Sequoiadendron giganteum
SEGI_37768 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06814 Striga asiatica
Solyc05g009940.4 Solanum lycopersicum
Sopen05g005750 Solanum pennellii
Sp2g14940 Schrenkiella parvula
TAR629G2041 Trochodendron aralioides
THA.LOC104825717 Tarenaya hassleriana
Thecc.02G362600 Theobroma cacao
Thhalv10003928m.g Eutrema salsugineum
TPR.G20820 Trifolium pratense
TPR.G2697 Trifolium pratense
TWI75G0366 Tripterygium wilfordii
TWI79G0162 Tripterygium wilfordii
vmacro01361 Vaccinium macrocarpon
VMungo1215G1906 Vigna mungo
Zm00001eb281400 Zea mays
Zm00001eb382040 Zea mays

User provided reference genes

Program Settings