Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p39550 Brassica napus
Aa31LG3G1920 Aethionema arabicum
Aa31sc161G10 Aethionema arabicum
Aa31sc277G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis
Actinidia26461 Actinidia chinensis
Ah.08g212230 Amaranthus hybridus
AL3G20610 Arabidopsis lyrata
AL614U10010 Arabidopsis lyrata
Aqoxy4G02911 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea
AT3G09430 Arabidopsis thaliana
ATR0559G191 Amborella trichopoda
ATR0585G031 Amborella trichopoda
ATR0629G084 Amborella trichopoda
ATR0681G110 Amborella trichopoda
ATR0743G189 Amborella trichopoda
ATR0752G168 Amborella trichopoda
ATR0807G084 Amborella trichopoda
ATR1132G091 Amborella trichopoda
Atru.chr11.672 Acer truncatum
Atru.chr8.1962 Acer truncatum
AUR62040983 Chenopodium quinoa
AUR62040984 Chenopodium quinoa
AUR62042106 Chenopodium quinoa
AUR62042107 Chenopodium quinoa
BcaC05g29673 Brassica carinata
BolC5t34508H Brassica oleracea
BraA05t22736Z Brassica rapa
C05p58580 Brassica napus
CAN.G326.19 Capsicum annuum
CANSAT35G0626 Cannabis sativa
CARHR083840 Cardamine hirsuta
Carub.0003s0853 Capsella rubella
Ca_11335_v3 Cicer arietinum L.
CBR_g84850 Chara braunii
Cc06_g02710 Coffea canephora
CDE02G2228 Ceratophyllum demersum
CDE09G1242 Ceratophyllum demersum
Ciclev10012389m.g Citrus clementina
CiPaw.09G191700 Carya illinoinensis
ClCG10G021100 Citrullus lanatus
COL.COLO4_14816 Corchorus olitorius
Cpa.g.sc188.15 Carica papaya
CsaV3_3G034930 Cucumis sativus L.
CSS0017232 Camellia sinensis var. sinensis
DCAR_014846 Daucus carota
Dinv35614 Davidia involucrata
Duzib093G0902 Durio zibethinus
ECA236G0397 Erigeron canadensis
EL10Ac7g17297 Beta vulgaris
Eucgr.K03142 Eucalyptus grandis
FAN02G1739 Fragaria x ananassa
FAN05G2294 Fragaria x ananassa
FAN09G4835 Fragaria x ananassa
FAN14G0594 Fragaria x ananassa
FvH4_6g13970 Fragaria vesca
Glyma.08G358600 Glycine max
Gohir.A09G156700 Gossypium hirsutum
Gohir.D09G152000 Gossypium hirsutum
Gorai.006G173400 Gossypium raimondii
GSVIVG01034185001 Vitis vinifera
HanXRQChr04g0124851 Helianthus annuus
HPP92_012592 Vanilla planifolia
Hund12078 Selenicereus undatus
Lalb_Chr19g0125411 Lupinus albus
Lj1g0010963 Lotus japonicus
Lj2A96T66 Lonicera japonica
Lsat_1_v5_gn_8_82780 Lactuca sativa
Manes.09G089800 Manihot esculenta
Mapoly0001s0170 Marchantia polymorpha
MBI14_g37824_MAGBIO Magnolia biondii
MD02G1131100 Malus domestica
MD04G1127200 Malus domestica
MD05G1218700 Malus domestica
MD12G1140400 Malus domestica
MD15G1437500 Malus domestica
MD16G1182100 Malus domestica
Medtr7g060340 Medicago truncatula
MELO3C009261.2 Cucumis melo
Migut.J00335 Erythranthe guttata
MSTRG.19088 Avicennia marina
Nitab4.5_0000761g0070 Nicotiana tabacum
Nitab4.5_0003552g0020 Nicotiana tabacum
Nitab4.5_0005449g0010 Nicotiana tabacum
Nitab4.5_0005575g0040 Nicotiana tabacum
Nitab4.5_0027058g0010 Nicotiana tabacum
Nn2g10382 Nelumbo nucifera
Oeu049236.1 Olea europaea
Os07g0695700 Oryza sativa ssp. japonica
Peaxi162Scf00165g01519 Petunia axillaris
Peaxi162Scf00710g00212 Petunia axillaris
PGR004G1893 Punica granatum
PGSC0003DMG400008843 Solanum tuberosum
Phvul.008G100000 Phaseolus vulgaris
Potri.006G084500 Populus trichocarpa
Prupe.6G253700 Prunus persica
Psat3g141480 Pisum sativum
PSO339G0986 Papaver somniferum
PSO384G0023 Papaver somniferum
QL01p053860 Quercus lobata
QL01p055053 Quercus lobata
QL07p048128 Quercus lobata
QL93p0107_0195 Quercus lobata
RcHm_v2.0_Chr3g0466791 Rosa chinensis
Rhsim05G0191600 Rhododendron simsii
Sabra06G0064100 Salix brachista
Sc20g0004680 Simmondsia chinensis
Sed0005156 Sechium edule
SEGI_14743 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33791 Striga asiatica
SGA_v2.0_scaffold18G08259 Striga asiatica
SHI12668 Sapria himalayana
SMO196G0131 Selaginella moellendorffii
SMO230G0120 Selaginella moellendorffii
Solyc09g010710.4 Solanum lycopersicum
Sopen09g005420 Solanum pennellii
Sp3g07800 Schrenkiella parvula
TAR623G1666 Trochodendron aralioides
TAR633G2221 Trochodendron aralioides
THA.LOC104816277 Tarenaya hassleriana
Thecc.05G040800 Theobroma cacao
Thhalv10021243m.g Eutrema salsugineum
TWI74G0730 Tripterygium wilfordii
vmacro20144 Vaccinium macrocarpon
VMungo1309G0027 Vigna mungo
VMungo1383G0921 Vigna mungo
VMungo1383G1328 Vigna mungo
Zm00001eb105220 Zea mays

User provided reference genes

Program Settings