Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p21820 Brassica napus
Aa31LG4G14360 Aethionema arabicum
Aa31LG9G7040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1463 Anthoceros agrestis
Actinidia07228 Actinidia chinensis
Actinidia24194 Actinidia chinensis
Actinidia24195 Actinidia chinensis
Ah.08g215990 Amaranthus hybridus
AL5G22730 Arabidopsis lyrata
Aqoxy4G02840 Aquilegia oxysepala
Aqoxy7G01340 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GZ1FF1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LG5WAH Arachis hypogaea
AT3G44600 Arabidopsis thaliana
ATR0820G178 Amborella trichopoda
Atru.chr3.3339 Acer truncatum
AUR62009798 Chenopodium quinoa
AUR62039246 Chenopodium quinoa
BcaB01g01158 Brassica carinata
BcaC01g02060 Brassica carinata
BolC3t19161H Brassica oleracea
BraA06t25273Z Brassica rapa
C03p69060 Brassica napus
CAN.G644.8 Capsicum annuum
CANSAT54G2980 Cannabis sativa
CARHR151580 Cardamine hirsuta
Carub.0005s1024 Capsella rubella
Carub.0015s0019 Capsella rubella
Ca_01669_v3 Cicer arietinum L.
CBR_g45485 Chara braunii
Cc01_g09550 Coffea canephora
CDE04G0784 Ceratophyllum demersum
CDE04G3392 Ceratophyllum demersum
Cfa010061 Carpinus fangiana
Ciclev10028028m.g Citrus clementina
CiPaw.14G102500 Carya illinoinensis
ClCG01G012500 Citrullus lanatus
COL.COLO4_19942 Corchorus olitorius
Cpa.g.c27498 Carica papaya
Cpa.g.c29395 Carica papaya
Cpa.g.sc31.94 Carica papaya
Cre10.g453900 Chlamydomonas reinhardtii
CsaV3_1G014630 Cucumis sativus L.
CSS0014801 Camellia sinensis var. sinensis
CSS0043043 Camellia sinensis var. sinensis
DCAR_006150 Daucus carota
Dinv42577 Davidia involucrata
Duzib170G0934 Durio zibethinus
ECA233G1240 Erigeron canadensis
EL10Ac7g15788 Beta vulgaris
Eucgr.J00461 Eucalyptus grandis
Eucgr.J00463 Eucalyptus grandis
FAN11G0873 Fragaria x ananassa
FAN21G0232 Fragaria x ananassa
FAN25G0117 Fragaria x ananassa
FAN25G0992 Fragaria x ananassa
FvH4_3g24280 Fragaria vesca
Glyma.12G182700 Glycine max
Glyma.13G318300 Glycine max
Gohir.A07G108500 Gossypium hirsutum
Gohir.A07G108720 Gossypium hirsutum
Gohir.D07G112300 Gossypium hirsutum
Gorai.001G120700 Gossypium raimondii
HanXRQChr04g0094681 Helianthus annuus
Haze_23428 Corylus avellana
Haze_26326 Corylus avellana
Hma1.2p1_0305F.1_g119430 Hydrangea macrophylla
Hma1.2p1_0305F.1_g119440 Hydrangea macrophylla
HPP92_001977 Vanilla planifolia
Hund20866 Selenicereus undatus
Lalb_Chr14g0374131 Lupinus albus
Lj2C989G2 Lonicera japonica
Lj3g0007481 Lotus japonicus
Lsat_1_v5_gn_6_39720 Lactuca sativa
Lsat_1_v5_gn_6_56741 Lactuca sativa
Lsat_1_v5_gn_8_43261 Lactuca sativa
Manes.04G006500 Manihot esculenta
Manes.14G162200 Manihot esculenta
Mapoly0008s0208 Marchantia polymorpha
MBI17_g37522_MAGBIO Magnolia biondii
MCO06G086 Micromonas commoda
MD03G1138000 Malus domestica
MD11G1160100 Malus domestica
Medtr2g085075 Medicago truncatula
MELO3C004752.2 Cucumis melo
Migut.N02503 Erythranthe guttata
MSTRG.17716 Avicennia marina
Nitab4.5_0003532g0080 Nicotiana tabacum
Nitab4.5_0004240g0040 Nicotiana tabacum
Nn6g34999 Nelumbo nucifera
Oeu035545.1 Olea europaea
Os08g0557500 Oryza sativa ssp. japonica
Peaxi162Scf00544g01012 Petunia axillaris
PGR119G0139 Punica granatum
PGSC0003DMG400007418 Solanum tuberosum
Phvul.005G126100 Phaseolus vulgaris
Potri.009G146400 Populus trichocarpa
Pp3c9_24450 Physcomitrium patens
PRCOL_00001826 Prasinoderma coloniale
Prupe.6G123000 Prunus persica
Psat5g256080 Pisum sativum
PSO339G1139 Papaver somniferum
PSO384G3065 Papaver somniferum
QL01p013297 Quercus lobata
RcHm_v2.0_Chr5g0043491 Rosa chinensis
RcHm_v2.0_Chr5g0043561 Rosa chinensis
RcHm_v2.0_Chr5g0043591 Rosa chinensis
Rhsim02G0084400 Rhododendron simsii
Sabra04G0125300 Salix brachista
Sabra09G0113200 Salix brachista
Sabra09G0115600 Salix brachista
SalBow3G1277 Salvia bowleyana
Sc21g0004790 Simmondsia chinensis
Sed0002834 Sechium edule
SEGI_11529 Sequoiadendron giganteum
SEGI_28586 Sequoiadendron giganteum
SEGI_41619 Sequoiadendron giganteum
SGA_v2.0_scaffold102G29927 Striga asiatica
SHI00546 Sapria himalayana
SMO364G0191 Selaginella moellendorffii
Solyc11g067090.2 Solanum lycopersicum
Sopen11g026800 Solanum pennellii
Sp5g16610 Schrenkiella parvula
TAR636G0978 Trochodendron aralioides
THA.LOC104799539 Tarenaya hassleriana
Thecc.09G288400 Theobroma cacao
Thhalv10002440m.g Eutrema salsugineum
TPR.G23395 Trifolium pratense
TWI79G0633 Tripterygium wilfordii
TWI79G1360 Tripterygium wilfordii
VMungo1080G0899 Vigna mungo
Zm00001eb176200 Zea mays

User provided reference genes

Program Settings