Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12160 Brassica napus
Aa31LG6G2840 Aethionema arabicum
Aa31LG9G8720 Aethionema arabicum
Actinidia21529 Actinidia chinensis
Ah.10g030910 Amaranthus hybridus
AL7G33400 Arabidopsis lyrata
Aqoxy2G00263 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9Z0TAG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P50PF0 Arachis hypogaea
AT4G20740 Arabidopsis thaliana
ATR0820G217 Amborella trichopoda
Atru.BG.296.p Acer truncatum
Atru.chr10.2008 Acer truncatum
AUR62026807 Chenopodium quinoa
AUR62037245 Chenopodium quinoa
BcaC09g51316 Brassica carinata
BcaNung04156 Brassica carinata
BolC1t01403H Brassica oleracea
BraA01t01158Z Brassica rapa
C01p14480 Brassica napus
CAN.G410.36 Capsicum annuum
CANSAT80G0799 Cannabis sativa
CARHR227290 Cardamine hirsuta
Carub.0007s2070 Capsella rubella
Ca_09585_v3 Cicer arietinum L.
Ca_09586_v3 Cicer arietinum L.
Ca_09587_v3 Cicer arietinum L.
Ca_24341_v3 Cicer arietinum L.
Ca_24344_v3 Cicer arietinum L.
Ca_25879_v3 Cicer arietinum L.
Cc09_g07760 Coffea canephora
CDE07G0106 Ceratophyllum demersum
Cfa002200 Carpinus fangiana
Ciclev10030824m.g Citrus clementina
CiPaw.04G079400 Carya illinoinensis
ClCG01G007570 Citrullus lanatus
COL.COLO4_19343 Corchorus olitorius
CsaV3_5G024580 Cucumis sativus L.
CSS0008088 Camellia sinensis var. sinensis
CSS0029678 Camellia sinensis var. sinensis
DCAR_025034 Daucus carota
Dinv03571 Davidia involucrata
Dinv05038 Davidia involucrata
Dinv32060 Davidia involucrata
Duzib106G0003 Durio zibethinus
ECA248G3068 Erigeron canadensis
EL10Ac2g02881 Beta vulgaris
EL10Ac2g03340 Beta vulgaris
EL10Ac5g11942 Beta vulgaris
Eucgr.C02304 Eucalyptus grandis
Eucgr.C02463 Eucalyptus grandis
Eucgr.J01726 Eucalyptus grandis
FAN03G2603 Fragaria x ananassa
FAN06G2970 Fragaria x ananassa
FAN10G2343 Fragaria x ananassa
FvH4_7g02120 Fragaria vesca
Glyma.06G236700 Glycine max
Glyma.20G097200 Glycine max
Glyma.20G115000 Glycine max
Gohir.A06G158900 Gossypium hirsutum
Gohir.D06G164800 Gossypium hirsutum
Gorai.010G192200 Gossypium raimondii
GSVIVG01000864001 Vitis vinifera
Hma1.2p1_0579F.1_g182710 Hydrangea macrophylla
Hma1.2p1_0579F.1_g182720 Hydrangea macrophylla
HPP92_000751 Vanilla planifolia
Hund13321 Selenicereus undatus
Lalb_Chr25g0282721 Lupinus albus
Lj3g0002161 Lotus japonicus
Lj7A578T58 Lonicera japonica
Lsat_1_v5_gn_1_100901 Lactuca sativa
Manes.05G118900 Manihot esculenta
MD02G1297100 Malus domestica
MD07G1026900 Malus domestica
Medtr3g023180 Medicago truncatula
MELO3C005140.2 Cucumis melo
Migut.M00355 Erythranthe guttata
Migut.N01822 Erythranthe guttata
MSTRG.27162 Avicennia marina
Nitab4.5_0000316g0260 Nicotiana tabacum
Nitab4.5_0001775g0060 Nicotiana tabacum
Nn3g17081 Nelumbo nucifera
Nn3g17082 Nelumbo nucifera
Oeu006490.1 Olea europaea
Oeu027349.1 Olea europaea
Os07g0179000 Oryza sativa ssp. japonica
Peaxi162Scf00087g00126 Petunia axillaris
PGR031G1457 Punica granatum
PGSC0003DMG400006820 Solanum tuberosum
Phvul.005G033500 Phaseolus vulgaris
Potri.003G203100 Populus trichocarpa
Pp3c17_24090 Physcomitrium patens
Pp3c3_2440 Physcomitrium patens
Pp3c5_2770 Physcomitrium patens
Prupe.2G027000 Prunus persica
Psat7g241480 Pisum sativum
PSO339G1208 Papaver somniferum
PSO384G2338 Papaver somniferum
QL05p089319 Quercus lobata
QL09p040247 Quercus lobata
QL10p041196 Quercus lobata
QL10p041489 Quercus lobata
RcHm_v2.0_Chr1g0319391 Rosa chinensis
Rhsim05G0126600 Rhododendron simsii
Sabra03G0150000 Salix brachista
SalBow6G5404 Salvia bowleyana
Sc14g0005840 Simmondsia chinensis
Sed0021022 Sechium edule
SEGI_06598 Sequoiadendron giganteum
SGA_v2.0_scaffold354G49737 Striga asiatica
SHI03956 Sapria himalayana
SHI03959 Sapria himalayana
SHI12605 Sapria himalayana
SMO196G0165 Selaginella moellendorffii
Solyc01g068180.3 Solanum lycopersicum
Sopen01g030120 Solanum pennellii
Sp7g18820 Schrenkiella parvula
TAR623G1116 Trochodendron aralioides
TAR623G1146 Trochodendron aralioides
TAR623G1283 Trochodendron aralioides
TAR623G1644 Trochodendron aralioides
TAR623G1677 Trochodendron aralioides
TAR624G0512 Trochodendron aralioides
THA.LOC104812083 Tarenaya hassleriana
Thecc.04G078800 Theobroma cacao
Thecc.10G003600 Theobroma cacao
Thhalv10024515m.g Eutrema salsugineum
TPR.G2735 Trifolium pratense
vmacro19755 Vaccinium macrocarpon
VMungo0647G2034 Vigna mungo
VMungo1080G0196 Vigna mungo
Zm00001eb301300 Zea mays

User provided reference genes

Program Settings