Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33050 Brassica napus
A06p43560 Brassica napus
Aa31LG2G7570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis
Actinidia01635 Actinidia chinensis
Actinidia26194 Actinidia chinensis
Ah.03g136770 Amaranthus hybridus
AL5G11840 Arabidopsis lyrata
Aqoxy385s001 Aquilegia oxysepala
Aqoxy6G00025 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea
AT2G02570 Arabidopsis thaliana
ATR1089G128 Amborella trichopoda
Atru.chr6.226 Acer truncatum
AUR62032450 Chenopodium quinoa
AUR62043876 Chenopodium quinoa
BcaC03g17157 Brassica carinata
BcaC06g31224 Brassica carinata
BolC2t11164H Brassica oleracea
BolC7t43840H Brassica oleracea
BraA02t08326Z Brassica rapa
BraA06t27241Z Brassica rapa
C02p50820 Brassica napus
C07p33290 Brassica napus
CAN.G855.54 Capsicum annuum
CANSAT01G0715 Cannabis sativa
CARHR145100 Cardamine hirsuta
Carub.0005s0157 Capsella rubella
Ca_13529_v3 Cicer arietinum L.
CBR_g40810 Chara braunii
Cc02_g23610 Coffea canephora
CDE02G1227 Ceratophyllum demersum
CDE04G0373 Ceratophyllum demersum
CDE04G1950 Ceratophyllum demersum
CDE07G1199 Ceratophyllum demersum
CDE08G0344 Ceratophyllum demersum
Ciclev10002025m.g Citrus clementina
CiPaw.06G176700 Carya illinoinensis
ClCG11G000310 Citrullus lanatus
COL.COLO4_31118 Corchorus olitorius
Cpa.g.sc173.14 Carica papaya
Cre02.g106550 Chlamydomonas reinhardtii
CsaV3_5G027420 Cucumis sativus L.
CSS0044256 Camellia sinensis var. sinensis
Dinv29634 Davidia involucrata
Dinv29679 Davidia involucrata
Duzib160G0844 Durio zibethinus
Duzib235G1547 Durio zibethinus
EL10Ac6g13990 Beta vulgaris
Eucgr.I02797 Eucalyptus grandis
FAN04G1604 Fragaria x ananassa
FAN08G2336 Fragaria x ananassa
FAN18G1253 Fragaria x ananassa
FvH4_3g40414 Fragaria vesca
FvH4_5g27830 Fragaria vesca
Glyma.07G272500 Glycine max
Glyma.17G001900 Glycine max
Gohir.A06G115800 Gossypium hirsutum
Gohir.D06G122800 Gossypium hirsutum
Gorai.010G142900 Gossypium raimondii
GSVIVG01023145001 Vitis vinifera
HanXRQChr15g0469671 Helianthus annuus
Haze_09983 Corylus avellana
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla
HPP92_002041 Vanilla planifolia
Hund15375 Selenicereus undatus
Lalb_Chr07g0176811 Lupinus albus
Lalb_Chr12g0195851 Lupinus albus
Lalb_Chr12g0195861 Lupinus albus
Lj4g0018327 Lotus japonicus
Lj5C284T7 Lonicera japonica
Lsat_1_v5_gn_9_83341 Lactuca sativa
Manes.07G030600 Manihot esculenta
Manes.10G106400 Manihot esculenta
Mapoly0080s0036 Marchantia polymorpha
Mapoly0107s0026 Marchantia polymorpha
MBI06_g16620_MAGBIO Magnolia biondii
MCO12G229 Micromonas commoda
MD08G1248300 Malus domestica
MD15G1443200 Malus domestica
Medtr4g134630 Medicago truncatula
Migut.N00865 Erythranthe guttata
MSTRG.27880 Avicennia marina
MSTRG.601 Avicennia marina
Nitab4.5_0003247g0070 Nicotiana tabacum
Nitab4.5_0007689g0010 Nicotiana tabacum
Nn5g27184 Nelumbo nucifera
Oeu028475.1 Olea europaea
Oeu028476.1 Olea europaea
Os08g0109900 Oryza sativa ssp. japonica
Peaxi162Scf00011g01920 Petunia axillaris
PGR142G3472 Punica granatum
PGSC0003DMG400020713 Solanum tuberosum
Phvul.003G075900 Phaseolus vulgaris
Potri.004G229200 Populus trichocarpa
Pp3c10_3580 Physcomitrium patens
Pp3c10_3582 Physcomitrium patens
Pp3c14_9240 Physcomitrium patens
Pp3c1_22040 Physcomitrium patens
PRCOL_00002712 Prasinoderma coloniale
Prupe.1G585700 Prunus persica
Psat4g000960 Pisum sativum
PSO017G5300 Papaver somniferum
PSO170G5162 Papaver somniferum
QL02p103359 Quercus lobata
RcHm_v2.0_Chr5g0068831 Rosa chinensis
RcHm_v2.0_Chr7g0219661 Rosa chinensis
Rhsim05G0115500 Rhododendron simsii
Sabra01G0174300 Salix brachista
Sc03g0006230 Simmondsia chinensis
Sed0006174 Sechium edule
SEGI_07435 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04460 Striga asiatica
SHI04993 Sapria himalayana
SMO117G0163 Selaginella moellendorffii
Solyc01g103020.4 Solanum lycopersicum
Sopen01g045430 Solanum pennellii
Sp2g13800 Schrenkiella parvula
TAR376G0556 Trochodendron aralioides
TAR628G1209 Trochodendron aralioides
THA.LOC104824089 Tarenaya hassleriana
Thecc.06G019900 Theobroma cacao
Thhalv10004677m.g Eutrema salsugineum
Thhalv10005196m.g Eutrema salsugineum
TPR.G6004 Trifolium pratense
TWI14G0757 Tripterygium wilfordii
unitig_22.g6849 Utricularia gibba
vmacro19830 Vaccinium macrocarpon
VMungo0766G0001 Vigna mungo
VMungo1148G0001 Vigna mungo
VMungo1215G1434 Vigna mungo
Zm00001eb174130 Zea mays

User provided reference genes

Program Settings