Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01450 Brassica napus
Aa31LG6G14390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis
Actinidia11996 Actinidia chinensis
Actinidia36442 Actinidia chinensis
Ah.02g125600 Amaranthus hybridus
AL5G41245 Arabidopsis lyrata
AL7G13080 Arabidopsis lyrata
AL7G13250 Arabidopsis lyrata
Aqoxy2G00045 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea
AT4G37510 Arabidopsis thaliana
ATR1096G061 Amborella trichopoda
Atru.chr3.165 Acer truncatum
Atru.chr3.194 Acer truncatum
AUR62003982 Chenopodium quinoa
AUR62040267 Chenopodium quinoa
BcaNung02059 Brassica carinata
BcaNung03665 Brassica carinata
BcaNung05084 Brassica carinata
BolC1t00157H Brassica oleracea
BraA01t00139Z Brassica rapa
C01p01620 Brassica napus
C07p62420 Brassica napus
CANSAT01G2549 Cannabis sativa
CARHR245910 Cardamine hirsuta
Carub.0007s0278 Capsella rubella
Ca_24720_v3 Cicer arietinum L.
Cc07_g06840 Coffea canephora
CDE04G1953 Ceratophyllum demersum
Cfa004102 Carpinus fangiana
Ciclev10025341m.g Citrus clementina
CiPaw.01G007000 Carya illinoinensis
ClCG01G017380 Citrullus lanatus
COL.COLO4_11542 Corchorus olitorius
Cpa.g.sc6.46 Carica papaya
CsaV3_6G043910 Cucumis sativus L.
CSS0024742 Camellia sinensis var. sinensis
CSS0030463 Camellia sinensis var. sinensis
DCAR_010834 Daucus carota
DCAR_021470 Daucus carota
Dinv26904 Davidia involucrata
Duzib147G0207 Durio zibethinus
Duzib264G0621 Durio zibethinus
ECA238G1085 Erigeron canadensis
EL10Ac6g15648 Beta vulgaris
Eucgr.C03692 Eucalyptus grandis
Eucgr.C03920 Eucalyptus grandis
FAN19G1445 Fragaria x ananassa
FAN23G1327 Fragaria x ananassa
FAN26G1436 Fragaria x ananassa
FAN28G0670 Fragaria x ananassa
FvH4_1g17270 Fragaria vesca
Glyma.01G192200 Glycine max
Glyma.05G104100 Glycine max
Glyma.11G049900 Glycine max
Gohir.A12G075200 Gossypium hirsutum
Gohir.D12G073300 Gossypium hirsutum
Gorai.008G080600 Gossypium raimondii
GSVIVG01000148001 Vitis vinifera
HanXRQChr14g0441861 Helianthus annuus
Haze_15309 Corylus avellana
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla
HPP92_017544 Vanilla planifolia
HPP92_017568 Vanilla planifolia
HPP92_018502 Vanilla planifolia
Hund13932 Selenicereus undatus
Lalb_Chr05g0213551 Lupinus albus
Lalb_Chr09g0323511 Lupinus albus
Lj2g0007837 Lotus japonicus
Lj4g0019986 Lotus japonicus
Lj7C88G8 Lonicera japonica
Lsat_1_v5_gn_2_83701 Lactuca sativa
Manes.13G113500 Manihot esculenta
Mapoly0005s0153 Marchantia polymorpha
MBI19_g10811_MAGBIO Magnolia biondii
MD15G1293700 Malus domestica
Medtr4g095410 Medicago truncatula
Medtr5g016070 Medicago truncatula
MELO3C007616.2 Cucumis melo
Migut.H00367 Erythranthe guttata
MSTRG.23690 Avicennia marina
Nitab4.5_0002331g0050 Nicotiana tabacum
Nitab4.5_0006689g0010 Nicotiana tabacum
Nn7g37208 Nelumbo nucifera
Oeu013280.1 Olea europaea
Os01g0810100 Oryza sativa ssp. japonica
Peaxi162Scf00365g00936 Petunia axillaris
PGR004G0129 Punica granatum
PGSC0003DMG400023692 Solanum tuberosum
Phvul.002G012600 Phaseolus vulgaris
Phvul.003G236900 Phaseolus vulgaris
Potri.007G053000 Populus trichocarpa
Pp3c5_10700 Physcomitrium patens
Prupe.6G223800 Prunus persica
Psat2g170280 Pisum sativum
Psat4g083600 Pisum sativum
PSO541G5579 Papaver somniferum
PSO675G2247 Papaver somniferum
RcHm_v2.0_Chr2g0107461 Rosa chinensis
Rhsim10G0102900 Rhododendron simsii
Sabra07G0046600 Salix brachista
SalBow6G1211 Salvia bowleyana
Sc16g0004970 Simmondsia chinensis
Sed0007349 Sechium edule
Sed0014779 Sechium edule
Sed0024674 Sechium edule
SEGI_10508 Sequoiadendron giganteum
SEGI_29234 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07420 Striga asiatica
SGA_v2.0_scaffold72G24093 Striga asiatica
SMO119G0428 Selaginella moellendorffii
Solyc10g080040.3 Solanum lycopersicum
Sopen10g030650 Solanum pennellii
Sp7g35190 Schrenkiella parvula
TAR625G0225 Trochodendron aralioides
TAR628G0943 Trochodendron aralioides
THA.LOC104807624 Tarenaya hassleriana
Thecc.01G069100 Theobroma cacao
Thhalv10024858m.g Eutrema salsugineum
TPR.G20955 Trifolium pratense
TPR.G23864 Trifolium pratense
TWI09G0178 Tripterygium wilfordii
unitig_0.g506 Utricularia gibba
vmacro05387 Vaccinium macrocarpon
vmacro05388 Vaccinium macrocarpon
VMungo0251G1033 Vigna mungo
VMungo1215G2035 Vigna mungo
Zm00001eb150280 Zea mays

User provided reference genes

Program Settings