Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p10240 Brassica napus
A10p19280 Brassica napus
Aa31LG1G13940 Aethionema arabicum
Actinidia30249 Actinidia chinensis
Actinidia39627 Actinidia chinensis
AL6G32300 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.1KQ2NT Arachis hypogaea
AT5G20740 Arabidopsis thaliana
Atru.chr7.1753 Acer truncatum
BcaB01g04772 Brassica carinata
BcaB08g36525 Brassica carinata
BcaC03g13796 Brassica carinata
BcaC04g19465 Brassica carinata
BolC2t07070H Brassica oleracea
BolC3t13647H Brassica oleracea
BolC9t58405H Brassica oleracea
BraA03t10333Z Brassica rapa
BraA10t44005Z Brassica rapa
C03p11760 Brassica napus
C09p55440 Brassica napus
CAN.G1118.1 Capsicum annuum
CAN.G816.17 Capsicum annuum
CANSAT56G1508 Cannabis sativa
CANSAT56G2656 Cannabis sativa
CARHR192070 Cardamine hirsuta
Carub.0006s1908 Capsella rubella
Ca_02247_v3 Cicer arietinum L.
Ca_11892_v3 Cicer arietinum L.
Ca_21331_v3 Cicer arietinum L.
Cc06_g12590 Coffea canephora
CDE05G1793 Ceratophyllum demersum
CDE05G2150 Ceratophyllum demersum
CDE08G0444 Ceratophyllum demersum
Cfa002953 Carpinus fangiana
Ciclev10009541m.g Citrus clementina
CiPaw.03G202400 Carya illinoinensis
ClCG03G014790 Citrullus lanatus
COL.COLO4_21222 Corchorus olitorius
CsaV3_1G041360 Cucumis sativus L.
CSS0015357 Camellia sinensis var. sinensis
DCAR_011926 Daucus carota
Dinv25519 Davidia involucrata
Duzib150G0434 Durio zibethinus
Duzib168G0261 Durio zibethinus
ECA236G2553 Erigeron canadensis
Eucgr.C03290 Eucalyptus grandis
FAN19G1303 Fragaria x ananassa
FAN23G1804 Fragaria x ananassa
FAN26G0369 Fragaria x ananassa
FAN26G0556 Fragaria x ananassa
FAN28G1957 Fragaria x ananassa
FvH4_1g09220 Fragaria vesca
Glyma.09G072700 Glycine max
Glyma.15G181600 Glycine max
Glyma.17G046800 Glycine max
Gohir.A05G035300 Gossypium hirsutum
Gohir.A07G016600 Gossypium hirsutum
Gohir.D05G036800 Gossypium hirsutum
Gohir.D07G016400 Gossypium hirsutum
Gorai.001G017200 Gossypium raimondii
Gorai.009G037300 Gossypium raimondii
HanXRQChr04g0125811 Helianthus annuus
HanXRQChr06g0178231 Helianthus annuus
Haze_26052 Corylus avellana
Hma1.2p1_0179F.1_g079250 Hydrangea macrophylla
HPP92_016222 Vanilla planifolia
HPP92_016244 Vanilla planifolia
Lalb_Chr07g0181351 Lupinus albus
Lalb_Chr08g0232781 Lupinus albus
Lj4g0007238 Lotus japonicus
Lj6g0004066 Lotus japonicus
Lj7P690T46 Lonicera japonica
Lsat_1_v5_gn_8_85500 Lactuca sativa
Manes.03G043600 Manihot esculenta
Manes.16G091600 Manihot esculenta
MBI19_g29892_MAGBIO Magnolia biondii
MD02G1099200 Malus domestica
MD15G1222000 Malus domestica
Medtr2g043560 Medicago truncatula
Medtr4g124855 Medicago truncatula
MELO3C015549.2 Cucumis melo
Migut.J00895 Erythranthe guttata
MSTRG.19435 Avicennia marina
Nitab4.5_0001565g0100 Nicotiana tabacum
Nitab4.5_0007773g0010 Nicotiana tabacum
Nn1g04323 Nelumbo nucifera
Nn6g35656 Nelumbo nucifera
Nn8g38554 Nelumbo nucifera
Oeu010831.1 Olea europaea
Oeu025290.1 Olea europaea
Oeu055334.1 Olea europaea
Peaxi162Scf00191g10112 Petunia axillaris
PGR044G2577 Punica granatum
PGSC0003DMG400002898 Solanum tuberosum
PGSC0003DMG400013553 Solanum tuberosum
Phvul.003G128500 Phaseolus vulgaris
Phvul.009G224200 Phaseolus vulgaris
Potri.006G137800 Populus trichocarpa
Prupe.7G193700 Prunus persica
Psat1g136960 Pisum sativum
Psat4g018280 Pisum sativum
PSO386G0277 Papaver somniferum
PSO724G0125 Papaver somniferum
QL11p002183 Quercus lobata
QL11p002509 Quercus lobata
QL11p002550 Quercus lobata
QL11p002639 Quercus lobata
RcHm_v2.0_Chr2g0095671 Rosa chinensis
RcHm_v2.0_Chr2g0095741 Rosa chinensis
Rhsim05G0003700 Rhododendron simsii
Sabra06G0108000 Salix brachista
SalBow6G1807 Salvia bowleyana
Sc08g0008970 Simmondsia chinensis
Sed0017017 Sechium edule
SGA_v2.0_scaffold281G46910 Striga asiatica
Solyc07g042390.3 Solanum lycopersicum
Solyc12g009270.1 Solanum lycopersicum
Sopen07g021990 Solanum pennellii
Sopen12g004250 Solanum pennellii
Sp6g23740 Schrenkiella parvula
TAR383G0312 Trochodendron aralioides
THA.LOC104799610 Tarenaya hassleriana
Thecc.09G071700 Theobroma cacao
Thhalv10014618m.g Eutrema salsugineum
TPR.G12545 Trifolium pratense
TPR.G31979 Trifolium pratense
TWI34G1403 Tripterygium wilfordii
TWI63G1797 Tripterygium wilfordii
unitig_26.g9186 Utricularia gibba
unitig_749.g14244 Utricularia gibba
vmacro17093 Vaccinium macrocarpon
vmacro17094 Vaccinium macrocarpon
vmacro23085 Vaccinium macrocarpon
VMungo1215G1021 Vigna mungo
VMungo1309G0363 Vigna mungo

User provided reference genes

Program Settings