Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p36140 Brassica napus
A05p39740 Brassica napus
Aa31LG3G1660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3747 Anthoceros agrestis
Actinidia16359 Actinidia chinensis
Actinidia24333 Actinidia chinensis
Ah.04g152490 Amaranthus hybridus
AL1G44350 Arabidopsis lyrata
AL3G20230 Arabidopsis lyrata
AL3G20260 Arabidopsis lyrata
Aqoxy2G00303 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.24D4KD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CPT0CW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GN5QKJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VEUG4Z Arachis hypogaea
AT3G09150 Arabidopsis thaliana
ATR0721G178 Amborella trichopoda
Atru.chr3.2823 Acer truncatum
Atru.chr3.3156 Acer truncatum
AUR62012030 Chenopodium quinoa
AUR62015366 Chenopodium quinoa
AUR62040930 Chenopodium quinoa
BcaB04g18547 Brassica carinata
BcaC01g04214 Brassica carinata
BcaC05g29644 Brassica carinata
BolC3t16647H Brassica oleracea
BolC5t34532H Brassica oleracea
BraA03t12785Z Brassica rapa
BraA05t22757Z Brassica rapa
C03p43800 Brassica napus
C05p58790 Brassica napus
CAN.G379.23 Capsicum annuum
CANSAT54G2776 Cannabis sativa
CARHR083510 Cardamine hirsuta
Carub.0003s0829 Capsella rubella
Ca_06446_v3 Cicer arietinum L.
CBR_g29537 Chara braunii
Cc01_g05830 Coffea canephora
CDE04G3352 Ceratophyllum demersum
Ciclev10015899m.g Citrus clementina
CiPaw.13G152800 Carya illinoinensis
ClCG03G012900 Citrullus lanatus
COL.COLO4_07231 Corchorus olitorius
Cpa.g.sc84.16 Carica papaya
CsaV3_1G043160 Cucumis sativus L.
CSS0034758 Camellia sinensis var. sinensis
CSS0042266 Camellia sinensis var. sinensis
DCAR_023769 Daucus carota
Dinv36194 Davidia involucrata
Dinv36196 Davidia involucrata
Duzib150G0890 Durio zibethinus
Duzib150G1254 Durio zibethinus
EL10Ac3g06915 Beta vulgaris
Eucgr.G00239 Eucalyptus grandis
Eucgr.G00240 Eucalyptus grandis
Eucgr.G00241 Eucalyptus grandis
Eucgr.J00724 Eucalyptus grandis
FAN11G0714 Fragaria x ananassa
FAN16G3704 Fragaria x ananassa
FAN21G0849 Fragaria x ananassa
FAN25G3713 Fragaria x ananassa
FvH4_3g28130 Fragaria vesca
Glyma.02G304700 Glycine max
Glyma.14G009100 Glycine max
Glyma.14G136300 Glycine max
Gohir.A13G217700 Gossypium hirsutum
Gohir.D13G221350 Gossypium hirsutum
Gorai.013G252400 Gossypium raimondii
GSVIVG01037233001 Vitis vinifera
HanXRQChr03g0090721 Helianthus annuus
HanXRQChr09g0261041 Helianthus annuus
Haze_13921 Corylus avellana
Haze_25177 Corylus avellana
Hma1.2p1_1115F.1_g258840 Hydrangea macrophylla
Hma1.2p1_2660F.1_g326385 Hydrangea macrophylla
Hma1.2p1_2660F.1_g326390 Hydrangea macrophylla
Hma1.2p1_2660F.1_g326395 Hydrangea macrophylla
Hund08152 Selenicereus undatus
Lalb_Chr04g0247351 Lupinus albus
Lalb_Chr04g0247551 Lupinus albus
Lj1A304T23 Lonicera japonica
LjContig00081g0007858 Lotus japonicus
Lsat_1_v5_gn_3_113801 Lactuca sativa
Manes.02G142200 Manihot esculenta
Mapoly0015s0102 Marchantia polymorpha
MD03G1168900 Malus domestica
MD03G1169100 Malus domestica
Medtr5g097080 Medicago truncatula
MELO3C029500.2 Cucumis melo
Migut.N02363 Erythranthe guttata
MSTRG.17626 Avicennia marina
Nitab4.5_0000718g0060 Nicotiana tabacum
Nitab4.5_0009172g0010 Nicotiana tabacum
Nitab4.5_0009172g0020 Nicotiana tabacum
Nn2g14749 Nelumbo nucifera
Nn2g14945 Nelumbo nucifera
Nn2g15997 Nelumbo nucifera
Os01g0949400 Oryza sativa ssp. japonica
Peaxi162Scf00050g01211 Petunia axillaris
PGR119G0840 Punica granatum
PGSC0003DMG401022694 Solanum tuberosum
Phvul.008G284200 Phaseolus vulgaris
Potri.001G253700 Populus trichocarpa
Potri.009G048000 Populus trichocarpa
Pp3c13_10580 Physcomitrium patens
Prupe.4G258500 Prunus persica
Psat2g004880 Pisum sativum
PSO339G6039 Papaver somniferum
PSO384G1390 Papaver somniferum
QL01p017749 Quercus lobata
QL01p017754 Quercus lobata
RcHm_v2.0_Chr5g0050821 Rosa chinensis
Rhsim13G0216400 Rhododendron simsii
Sabra16G0154400 Salix brachista
Sc26g0004090 Simmondsia chinensis
Sed0013061 Sechium edule
SEGI_10447 Sequoiadendron giganteum
SGA_v2.0_scaffold271G46330 Striga asiatica
SMO353G0322 Selaginella moellendorffii
Solyc01g008930.4 Solanum lycopersicum
Sopen01g004420 Solanum pennellii
Sp3g07570 Schrenkiella parvula
TAR369G0618 Trochodendron aralioides
THA.LOC104799118 Tarenaya hassleriana
Thecc.09G243800 Theobroma cacao
Thhalv10011657m.g Eutrema salsugineum
TPR.G1255 Trifolium pratense
TWI79G0828 Tripterygium wilfordii
unitig_21.g20897 Utricularia gibba
vmacro04006 Vaccinium macrocarpon
vmacro04007 Vaccinium macrocarpon
VMungo0647G0340 Vigna mungo
Zm00001eb363080 Zea mays

User provided reference genes

Program Settings