Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p54720 Brassica napus
A09p55230 Brassica napus
Aa31LG5G18500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3066 Anthoceros agrestis
Actinidia25695 Actinidia chinensis
Actinidia27570 Actinidia chinensis
Actinidia28224 Actinidia chinensis
AL4G18970 Arabidopsis lyrata
Aqoxy2G00096 Aquilegia oxysepala
Aqoxy3G01546 Aquilegia oxysepala
Aqoxy3G01853 Aquilegia oxysepala
Aqoxy5G02406 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.12X2WP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2ULK6I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FV9EQX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VR587A Arachis hypogaea
AT2G26350 Arabidopsis thaliana
ATR0598G074 Amborella trichopoda
Atru.chr7.1858 Acer truncatum
AUR62009089 Chenopodium quinoa
AUR62020581 Chenopodium quinoa
BcaB08g35248 Brassica carinata
BcaC07g40824 Brassica carinata
BolC8t51391H Brassica oleracea
BraA09t40881Z Brassica rapa
BraA09t40930Z Brassica rapa
C08p38160 Brassica napus
CAN.G6.15 Capsicum annuum
CANSAT25G0005 Cannabis sativa
CARHR118440 Cardamine hirsuta
Carub.0004s0626 Capsella rubella
Ca_13107_v3 Cicer arietinum L.
CBR_g34477 Chara braunii
Cc08_g01270 Coffea canephora
CDE06G1722 Ceratophyllum demersum
Cfa018014 Carpinus fangiana
Cfa027250 Carpinus fangiana
Ciclev10025877m.g Citrus clementina
CiPaw.15G092600 Carya illinoinensis
ClCG05G015690 Citrullus lanatus
COL.COLO4_21126 Corchorus olitorius
Cpa.g.sc126.34 Carica papaya
Cre07.g337050 Chlamydomonas reinhardtii
CsaV3_4G036010 Cucumis sativus L.
CSS0021293 Camellia sinensis var. sinensis
DCAR_003715 Daucus carota
Dinv41837 Davidia involucrata
Duzib150G1275 Durio zibethinus
ECA234G1597 Erigeron canadensis
EL10Ac2g03793 Beta vulgaris
Eucgr.C03149 Eucalyptus grandis
FAN15G1366 Fragaria x ananassa
FAN20G1335 Fragaria x ananassa
FAN24G1737 Fragaria x ananassa
FAN27G2028 Fragaria x ananassa
FvH4_2g31140 Fragaria vesca
Glyma.14G099100 Glycine max
Glyma.17G225600 Glycine max
Gohir.A07G020300 Gossypium hirsutum
Gohir.D07G020000 Gossypium hirsutum
Gorai.001G020700 Gossypium raimondii
GSVIVG01035453001 Vitis vinifera
HanXRQChr12g0359011 Helianthus annuus
Haze_18115 Corylus avellana
Hma1.2p1_0231F.1_g097400 Hydrangea macrophylla
Hma1.2p1_0231F.1_g097410 Hydrangea macrophylla
HPP92_027843 Vanilla planifolia
HPP92_027844 Vanilla planifolia
Lalb_Chr09g0334801 Lupinus albus
Lj2A627G34 Lonicera japonica
Lj5g0001901 Lotus japonicus
Lsat_1_v5_gn_3_114241 Lactuca sativa
Lsat_1_v5_gn_5_79500 Lactuca sativa
Manes.03G052700 Manihot esculenta
Mapoly0029s0064 Marchantia polymorpha
MBI19_g11845_MAGBIO Magnolia biondii
MCO12G124 Micromonas commoda
MD08G1070400 Malus domestica
MD15G1051800 Malus domestica
Medtr1g015390 Medicago truncatula
MELO3C016909.2 Cucumis melo
MELO3C032333.2 Cucumis melo
Migut.A00085 Erythranthe guttata
Migut.A00086 Erythranthe guttata
MSTRG.25981 Avicennia marina
Nitab4.5_0000446g0240 Nicotiana tabacum
Nitab4.5_0009773g0010 Nicotiana tabacum
Nn8g38706 Nelumbo nucifera
Oeu027284.3 Olea europaea
Os07g0608800 Oryza sativa ssp. japonica
Os07g0608900 Oryza sativa ssp. japonica
Peaxi162Scf00101g01522 Petunia axillaris
PGR004G2090 Punica granatum
PGSC0003DMG400003758 Solanum tuberosum
Phvul.001G039000 Phaseolus vulgaris
Potri.006G222000 Populus trichocarpa
Pp3c13_19650 Physcomitrium patens
PRCOL_00001676 Prasinoderma coloniale
Prupe.1G405700 Prunus persica
Psat0s2173g0120 Pisum sativum
Psat6g022600 Pisum sativum
PSO210G0521 Papaver somniferum
PSO210G7793 Papaver somniferum
QL04p096581 Quercus lobata
QL06p019149 Quercus lobata
RcHm_v2.0_Chr4g0387071 Rosa chinensis
RcHm_v2.0_Chr6g0311631 Rosa chinensis
Rhsim03G0040100 Rhododendron simsii
Sabra06G0171700 Salix brachista
SalBow2G1269 Salvia bowleyana
Sc09g0010060 Simmondsia chinensis
Sc09g0010090 Simmondsia chinensis
Sed0000493 Sechium edule
Sed0012871 Sechium edule
SEGI_09068 Sequoiadendron giganteum
SGA_v2.0_scaffold64G21865 Striga asiatica
SHI18844 Sapria himalayana
Solyc04g080930.4 Solanum lycopersicum
Solyc08g061880.2 Solanum lycopersicum
Sopen04g034540 Solanum pennellii
Sp4g07000 Schrenkiella parvula
TAR383G0824 Trochodendron aralioides
THA.LOC104806019 Tarenaya hassleriana
Thecc.09G062000 Theobroma cacao
Thhalv10002014m.g Eutrema salsugineum
TPR.G10653 Trifolium pratense
TPR.G38878 Trifolium pratense
TPR.G40658 Trifolium pratense
TWI15G0825 Tripterygium wilfordii
TWI38G0260 Tripterygium wilfordii
TWI38G1843 Tripterygium wilfordii
unitig_748.g8240 Utricularia gibba
vmacro07801 Vaccinium macrocarpon
VMungo0647G0599 Vigna mungo
Zm00001eb108960 Zea mays

User provided reference genes

Program Settings