Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08470 Brassica napus
Aa31LG2G20910 Aethionema arabicum
Ah.09g223860 Amaranthus hybridus
Ah.10g037300 Amaranthus hybridus
AL7G22650 Arabidopsis lyrata
Aqoxy1G00378 Aquilegia oxysepala
Aqoxy4G03142 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea
AT4G29660 Arabidopsis thaliana
ATR0602G199 Amborella trichopoda
Atru.BG.21.p Acer truncatum
Atru.BG.266.p Acer truncatum
AUR62033506 Chenopodium quinoa
AUR62039390 Chenopodium quinoa
BcaC09g51744 Brassica carinata
BcaC09g52211 Brassica carinata
BolC1t00945H Brassica oleracea
BraA01t00794Z Brassica rapa
C01p09830 Brassica napus
CAN.G1241.20 Capsicum annuum
CANSAT78G0210 Cannabis sativa
CARHR237500 Cardamine hirsuta
Carub.0007s1086 Capsella rubella
Ca_07409_v3 Cicer arietinum L.
CBR_g36562 Chara braunii
Cc06_g11300 Coffea canephora
CDE06G0459 Ceratophyllum demersum
CDE06G1459 Ceratophyllum demersum
Cfa003097 Carpinus fangiana
Ciclev10010392m.g Citrus clementina
CiPaw.03G217300 Carya illinoinensis
ClCG03G015670 Citrullus lanatus
COL.COLO4_18212 Corchorus olitorius
Cpa.g.sc20.158 Carica papaya
CsaV3_1G040340 Cucumis sativus L.
CSS0005546 Camellia sinensis var. sinensis
CSS0025569 Camellia sinensis var. sinensis
DCAR_011984 Daucus carota
Dinv36757 Davidia involucrata
Duzib151G0847 Durio zibethinus
Duzib187G0878 Durio zibethinus
Duzib187G1084 Durio zibethinus
ECA234G3968 Erigeron canadensis
EL10Ac2g04637 Beta vulgaris
Eucgr.C03889 Eucalyptus grandis
FAN19G0937 Fragaria x ananassa
FAN19G2784 Fragaria x ananassa
FAN19G3189 Fragaria x ananassa
FAN23G0510 Fragaria x ananassa
FAN26G0193 Fragaria x ananassa
FAN26G1568 Fragaria x ananassa
FvH4_1g07240 Fragaria vesca
FvH4_1g24820 Fragaria vesca
Glyma.08G343600 Glycine max
Glyma.18G151700 Glycine max
Gohir.A02G019200 Gossypium hirsutum
Gohir.D02G022500 Gossypium hirsutum
Gorai.005G027900 Gossypium raimondii
GSVIVG01015215001 Vitis vinifera
HanXRQChr10g0319271 Helianthus annuus
HanXRQChr12g0354791 Helianthus annuus
HPP92_009139 Vanilla planifolia
Hund14283 Selenicereus undatus
Lalb_Chr03g0041061 Lupinus albus
Lj1g0023726 Lotus japonicus
Lsat_1_v5_gn_5_145440 Lactuca sativa
Manes.03G032800 Manihot esculenta
Mapoly0063s0096 Marchantia polymorpha
MBI13_g44212_MAGBIO Magnolia biondii
MBI14_g41836_MAGBIO Magnolia biondii
MD02G1077000 Malus domestica
MD15G1205700 Malus domestica
Medtr7g021900 Medicago truncatula
Medtr7g051450 Medicago truncatula
MELO3C015461.2 Cucumis melo
Migut.H00760 Erythranthe guttata
Migut.H01159 Erythranthe guttata
Migut.J00600 Erythranthe guttata
Migut.J01065 Erythranthe guttata
Nitab4.5_0000095g0140 Nicotiana tabacum
Nitab4.5_0000540g0260 Nicotiana tabacum
Nitab4.5_0003079g0020 Nicotiana tabacum
Nitab4.5_0003152g0130 Nicotiana tabacum
Nitab4.5_0004795g0020 Nicotiana tabacum
Nitab4.5_0008958g0020 Nicotiana tabacum
Nitab4.5_0009931g0010 Nicotiana tabacum
Nn6g35447 Nelumbo nucifera
Nn8g38892 Nelumbo nucifera
Oeu039606.1 Olea europaea
Os05g0540200 Oryza sativa ssp. japonica
Peaxi162Scf00015g00716 Petunia axillaris
Peaxi162Scf00354g00223 Petunia axillaris
Peaxi162Scf00498g00124 Petunia axillaris
PGR102G3100 Punica granatum
PGSC0003DMG400000281 Solanum tuberosum
Phvul.005G056600 Phaseolus vulgaris
Phvul.008G136000 Phaseolus vulgaris
Phvul.008G136200 Phaseolus vulgaris
Potri.012G001800 Populus trichocarpa
Pp3c13_20310 Physcomitrium patens
Prupe.7G211400 Prunus persica
Psat0s10921g0080 Pisum sativum
Psat6g162800 Pisum sativum
Psat6g183440 Pisum sativum
Psat6g183640 Pisum sativum
Psat6g183720 Pisum sativum
PSO210G0626 Papaver somniferum
PSO210G2337 Papaver somniferum
RcHm_v2.0_Chr2g0093151 Rosa chinensis
Rhsim03G0233100 Rhododendron simsii
Sabra12G0019500 Salix brachista
Sabra12G0019700 Salix brachista
Sc14g0000750 Simmondsia chinensis
Sed0014309 Sechium edule
SGA_v2.0_scaffold33G13431 Striga asiatica
SGA_v2.0_scaffold62G21600 Striga asiatica
SGA_v2.0_scaffold852G53671 Striga asiatica
SHI00379 Sapria himalayana
SHI21206 Sapria himalayana
Solyc12g008810.2 Solanum lycopersicum
Sopen12g003750 Solanum pennellii
Sp3g29900 Schrenkiella parvula
Sp7g27450 Schrenkiella parvula
TAR626G0225 Trochodendron aralioides
THA.LOC104801884 Tarenaya hassleriana
Thecc.09G090700 Theobroma cacao
Thhalv10026646m.g Eutrema salsugineum
TPR.G24304 Trifolium pratense
TWI32G0831 Tripterygium wilfordii
TWI34G0948 Tripterygium wilfordii
unitig_748.g8121 Utricularia gibba
vmacro06285 Vaccinium macrocarpon
vmacro23428 Vaccinium macrocarpon
VMungo1383G2743 Vigna mungo
Zm00001eb294300 Zea mays

User provided reference genes

Program Settings