Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p26160 Brassica napus
A09p38430 Brassica napus
Aa31sc143G20 Aethionema arabicum
Actinidia15359 Actinidia chinensis
Ah.05g176840 Amaranthus hybridus
AL1G41150 Arabidopsis lyrata
Aqoxy3G02272 Aquilegia oxysepala
Aqoxy6G01180 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GSJ1T0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L9LUFQ Arachis hypogaea
AT1G27620 Arabidopsis thaliana
ATR0585G138 Amborella trichopoda
Atru.chr13.416 Acer truncatum
AUR62014488 Chenopodium quinoa
AUR62034509 Chenopodium quinoa
BcaC01g01586 Brassica carinata
BcaC05g26757 Brassica carinata
BolC3t19692H Brassica oleracea
BraA08t34566Z Brassica rapa
BraA09t39352Z Brassica rapa
C03p74390 Brassica napus
C05p26260 Brassica napus
CANSAT25G3258 Cannabis sativa
CARHR134190 Cardamine hirsuta
Carub.0001s2613 Capsella rubella
Ca_01385_v3 Cicer arietinum L.
Ca_01386_v3 Cicer arietinum L.
Ca_15491_v3 Cicer arietinum L.
Ca_29782_v3 Cicer arietinum L.
Ca_30721_v3 Cicer arietinum L.
Cc10_g02480 Coffea canephora
CDE06G1409 Ceratophyllum demersum
CDE07G1726 Ceratophyllum demersum
Cfa013869 Carpinus fangiana
Ciclev10003709m.g Citrus clementina
CiPaw.07G157600 Carya illinoinensis
ClCG05G018720 Citrullus lanatus
ClCG08G014780 Citrullus lanatus
COL.COLO4_26251 Corchorus olitorius
Cpa.g.sc99.30 Carica papaya
CsaV3_2G028970 Cucumis sativus L.
CsaV3_3G045460 Cucumis sativus L.
CSS0031595 Camellia sinensis var. sinensis
DCAR_000388 Daucus carota
Dinv04826 Davidia involucrata
Dinv31783 Davidia involucrata
Dinv39451 Davidia involucrata
Duzib093G0541 Durio zibethinus
Duzib116G0788 Durio zibethinus
ECA246G1763 Erigeron canadensis
EL10Ac1g00626 Beta vulgaris
Eucgr.F01597 Eucalyptus grandis
FAN15G3710 Fragaria x ananassa
FAN20G3213 Fragaria x ananassa
FAN26G2717 Fragaria x ananassa
FAN27G1647 Fragaria x ananassa
FvH4_2g39380 Fragaria vesca
Glyma.06G029900 Glycine max
Glyma.14G071600 Glycine max
Gohir.A06G007000 Gossypium hirsutum
Gohir.D06G003500 Gossypium hirsutum
Gorai.010G008100 Gossypium raimondii
GSVIVG01009763001 Vitis vinifera
HanXRQChr03g0069661 Helianthus annuus
HanXRQChr05g0151281 Helianthus annuus
Haze_22546 Corylus avellana
HPP92_013421 Vanilla planifolia
Hund26900 Selenicereus undatus
Lalb_Chr08g0245951 Lupinus albus
Lj4A35T44 Lonicera japonica
Lj5g0010160 Lotus japonicus
Lsat_1_v5_gn_5_26801 Lactuca sativa
Manes.05G155400 Manihot esculenta
Manes.18G020700 Manihot esculenta
MBI10_g00748_MAGBIO Magnolia biondii
MD08G1026100 Malus domestica
MD15G1022800 Malus domestica
Medtr3g112180 Medicago truncatula
MELO3C010965.2 Cucumis melo
Migut.C00764 Erythranthe guttata
MSTRG.1252 Avicennia marina
MSTRG.25197 Avicennia marina
Nitab4.5_0001861g0020 Nicotiana tabacum
Nitab4.5_0006379g0010 Nicotiana tabacum
Nn1g05817 Nelumbo nucifera
Nn5g29697 Nelumbo nucifera
Oeu030593.1 Olea europaea
Os01g0104900 Oryza sativa ssp. japonica
Os01g0382200 Oryza sativa ssp. japonica
Peaxi162Scf00140g01012 Petunia axillaris
PGR031G1553 Punica granatum
PGR083G0166 Punica granatum
PGSC0003DMG400003747 Solanum tuberosum
Phvul.009G061200 Phaseolus vulgaris
Potri.002G032200 Populus trichocarpa
Potri.005G230900 Populus trichocarpa
Prupe.1G374800 Prunus persica
Psat5g015800 Pisum sativum
PSO144G0012 Papaver somniferum
PSO144G0067 Papaver somniferum
PSO170G4841 Papaver somniferum
PSO541G2710 Papaver somniferum
PSO675G1491 Papaver somniferum
PSO675G4095 Papaver somniferum
PSO729G0162 Papaver somniferum
QL02p009521 Quercus lobata
RcHm_v2.0_Chr6g0301621 Rosa chinensis
Rhsim06G0028900 Rhododendron simsii
Sabra02G0026100 Salix brachista
Sabra05G0178300 Salix brachista
SalBow7G4195 Salvia bowleyana
Sc15g0007130 Simmondsia chinensis
Sc26g0003400 Simmondsia chinensis
Sc26g0003410 Simmondsia chinensis
Sc26g0003420 Simmondsia chinensis
Sed0025914 Sechium edule
SEGI_22574 Sequoiadendron giganteum
SEGI_26809 Sequoiadendron giganteum
SGA_v2.0_scaffold201G41373 Striga asiatica
SGA_v2.0_scaffold201G41374 Striga asiatica
SHI08126 Sapria himalayana
SHI08127 Sapria himalayana
Solyc04g080720.4 Solanum lycopersicum
Sopen04g034310 Solanum pennellii
Sp1g23840 Schrenkiella parvula
TAR628G0508 Trochodendron aralioides
THA.LOC104822832 Tarenaya hassleriana
Thecc.08G032600 Theobroma cacao
Thhalv10007633m.g Eutrema salsugineum
TPR.G12341 Trifolium pratense
TPR.G34565 Trifolium pratense
TPR.G989 Trifolium pratense
TWI12G0527 Tripterygium wilfordii
vmacro21679 Vaccinium macrocarpon
VMungo1309G0022 Vigna mungo
Zm00001eb126880 Zea mays

User provided reference genes

Program Settings