Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07450 Brassica napus
A03p11980 Brassica napus
A10p15360 Brassica napus
Aa31LG1G11620 Aethionema arabicum
Actinidia23901 Actinidia chinensis
Ah.06g188660 Amaranthus hybridus
Ah.13g068140 Amaranthus hybridus
Ah.13g068160 Amaranthus hybridus
AL8G35250 Arabidopsis lyrata
Aqoxy3G03834 Aquilegia oxysepala
Aqoxy5G03549 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2I3SKZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AUQG9H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B244J5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NW0IJW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S3TFE0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TC15WI Arachis hypogaea
AT5G58920 Arabidopsis thaliana
ATR0618G061 Amborella trichopoda
AUR62001690 Chenopodium quinoa
AUR62020092 Chenopodium quinoa
BcaB01g04630 Brassica carinata
BcaB05g22458 Brassica carinata
BcaC03g14066 Brassica carinata
BolC2t07413H Brassica oleracea
BolC3t13854H Brassica oleracea
BraA02t05823Z Brassica rapa
BraA03t10509Z Brassica rapa
C02p13010 Brassica napus
C03p14070 Brassica napus
CAN.G206.119 Capsicum annuum
CANSAT54G2462 Cannabis sativa
CARHR272860 Cardamine hirsuta
Carub.0008s1956 Capsella rubella
Ca_05579_v3 Cicer arietinum L.
Ca_14903_v3 Cicer arietinum L.
Cc01_g13820 Coffea canephora
CDE05G1614 Ceratophyllum demersum
Cfa011642 Carpinus fangiana
Ciclev10029468m.g Citrus clementina
CiPaw.13G081900 Carya illinoinensis
ClCG03G001010 Citrullus lanatus
COL.COLO4_19094 Corchorus olitorius
COL.COLO4_19096 Corchorus olitorius
Cpa.g.sc112.60 Carica papaya
CsaV3_1G035930 Cucumis sativus L.
CSS0008956 Camellia sinensis var. sinensis
CSS0044332 Camellia sinensis var. sinensis
DCAR_005899 Daucus carota
DCAR_007395 Daucus carota
Dinv28589 Davidia involucrata
Dinv28608 Davidia involucrata
Duzib168G1908 Durio zibethinus
ECA247G0916 Erigeron canadensis
Eucgr.B02277 Eucalyptus grandis
FAN11G0404 Fragaria x ananassa
FAN16G1977 Fragaria x ananassa
FvH4_3g38110 Fragaria vesca
Glyma.14G191200 Glycine max
Glyma.18G064800 Glycine max
Gohir.A13G225100 Gossypium hirsutum
Gohir.D13G230100 Gossypium hirsutum
Gorai.013G260800 Gossypium raimondii
GSVIVG01024797001 Vitis vinifera
HanXRQChr02g0036251 Helianthus annuus
HanXRQChr08g0237061 Helianthus annuus
HanXRQChr08g0237161 Helianthus annuus
Haze_24248 Corylus avellana
Hma1.2p1_0543F.1_g175200 Hydrangea macrophylla
Hma1.2p1_3368F.1_g335610 Hydrangea macrophylla
Hund18861 Selenicereus undatus
Lalb_Chr15g0082641 Lupinus albus
Lalb_Chr15g0082661 Lupinus albus
Lalb_Chr17g0344951 Lupinus albus
Lj4P290T21 Lonicera japonica
Lj6g0020380 Lotus japonicus
LjContig00155g0000909 Lotus japonicus
Lsat_1_v5_gn_9_25761 Lactuca sativa
Manes.17G019100 Manihot esculenta
Mapoly0132s0009 Marchantia polymorpha
MBI06_g38157_MAGBIO Magnolia biondii
MD03G1077000 Malus domestica
MD11G1081300 Malus domestica
Medtr3g462700 Medicago truncatula
Medtr5g069660 Medicago truncatula
MELO3C020577.2 Cucumis melo
Migut.I00090 Erythranthe guttata
MSTRG.12084 Avicennia marina
Nitab4.5_0000564g0380 Nicotiana tabacum
Nitab4.5_0002265g0210 Nicotiana tabacum
Nn2g13609 Nelumbo nucifera
Nn7g36392 Nelumbo nucifera
Oeu009384.1 Olea europaea
Oeu049278.1 Olea europaea
Os01g0362000 Oryza sativa ssp. japonica
Peaxi162Scf00129g00059 Petunia axillaris
PGR102G2487 Punica granatum
PGR102G2751 Punica granatum
PGSC0003DMG400001310 Solanum tuberosum
PGSC0003DMG400001415 Solanum tuberosum
Phvul.006G066000 Phaseolus vulgaris
Phvul.008G263400 Phaseolus vulgaris
Potri.009G042300 Populus trichocarpa
Pp3c5_10690 Physcomitrium patens
Prupe.6G061600 Prunus persica
Psat2g059680 Pisum sativum
Psat5g161800 Pisum sativum
PSO017G5320 Papaver somniferum
PSO675G4048 Papaver somniferum
QL01p027076 Quercus lobata
RcHm_v2.0_Chr5g0068461 Rosa chinensis
RcHm_v2.0_Chr5g0068491 Rosa chinensis
Rhsim01G0234700 Rhododendron simsii
Sabra09G0029800 Salix brachista
SalBow2G1455 Salvia bowleyana
Sc12g0000960 Simmondsia chinensis
Sed0012895 Sechium edule
SEGI_26492 Sequoiadendron giganteum
SEGI_38965 Sequoiadendron giganteum
SEGI_40143 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32925 Striga asiatica
Solyc02g087650.4 Solanum lycopersicum
Sopen02g032400 Solanum pennellii
Sp6g20620 Schrenkiella parvula
TAR369G0142 Trochodendron aralioides
TAR369G0502 Trochodendron aralioides
TAR369G0898 Trochodendron aralioides
TAR633G1541 Trochodendron aralioides
THA.LOC104810731 Tarenaya hassleriana
Thecc.09G306800 Theobroma cacao
Thhalv10014880m.g Eutrema salsugineum
TPR.G13285 Trifolium pratense
TPR.G24015 Trifolium pratense
TWI31G0683 Tripterygium wilfordii
unitig_0.g448 Utricularia gibba
VMungo0647G2322 Vigna mungo
Zm00001eb031680 Zea mays

User provided reference genes

Program Settings