Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p39150 Brassica napus
A05p34360 Brassica napus
Aa31LG8G2300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.514 Anthoceros agrestis
Actinidia12546 Actinidia chinensis
Ah.04g164460 Amaranthus hybridus
AL3G27440 Arabidopsis lyrata
Aqoxy4G00576 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.10FGX8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PD8C8E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QT2X3H Arachis hypogaea
AT3G15090 Arabidopsis thaliana
ATR0602G106 Amborella trichopoda
Atru.chr2.2379 Acer truncatum
AUR62019503 Chenopodium quinoa
AUR62036135 Chenopodium quinoa
BcaB06g29534 Brassica carinata
BcaC01g03893 Brassica carinata
BcaC01g03898 Brassica carinata
BolC3t17014H Brassica oleracea
BolC5t33898H Brassica oleracea
BraA03t13064Z Brassica rapa
BraA05t22256Z Brassica rapa
C03p47500 Brassica napus
C05p52130 Brassica napus
CAN.G329.7 Capsicum annuum
CANSAT35G1865 Cannabis sativa
CARHR090050 Cardamine hirsuta
Carub.0003s1473 Capsella rubella
Ca_04028_v3 Cicer arietinum L.
CBR_g49987 Chara braunii
Cc05_g11570 Coffea canephora
CDE03G0368 Ceratophyllum demersum
Cfa020625 Carpinus fangiana
Ciclev10008721m.g Citrus clementina
CiPaw.11G166300 Carya illinoinensis
CiPaw.12G116700 Carya illinoinensis
ClCG05G009200 Citrullus lanatus
COL.COLO4_34031 Corchorus olitorius
Cpa.g.c46715 Carica papaya
Cpa.g.sc80.13 Carica papaya
CsaV3_3G019590 Cucumis sativus L.
CSS0001116 Camellia sinensis var. sinensis
CSS0006125 Camellia sinensis var. sinensis
CSS0008026 Camellia sinensis var. sinensis
CSS0008464 Camellia sinensis var. sinensis
CSS0025668 Camellia sinensis var. sinensis
CSS0039326 Camellia sinensis var. sinensis
CSS0043173 Camellia sinensis var. sinensis
DCAR_019576 Daucus carota
DCAR_019580 Daucus carota
DCAR_021003 Daucus carota
DCAR_021005 Daucus carota
Dinv20217 Davidia involucrata
Duzib170G0842 Durio zibethinus
Duzib177G0850 Durio zibethinus
Duzib213G1012 Durio zibethinus
ECA234G4269 Erigeron canadensis
EL10Ac4g08277 Beta vulgaris
Eucgr.F01180 Eucalyptus grandis
FAN11G3855 Fragaria x ananassa
FAN16G1937 Fragaria x ananassa
FAN21G2449 Fragaria x ananassa
FAN25G3373 Fragaria x ananassa
FvH4_3g19130 Fragaria vesca
Glyma.12G227400 Glycine max
Glyma.13G272900 Glycine max
Gohir.A01G060100 Gossypium hirsutum
Gohir.D01G046600 Gossypium hirsutum
Gorai.002G066100 Gossypium raimondii
GSVIVG01014259001 Vitis vinifera
HanXRQChr10g0302461 Helianthus annuus
Haze_09378 Corylus avellana
HPP92_021507 Vanilla planifolia
HPP92_021512 Vanilla planifolia
Hund22810 Selenicereus undatus
Lalb_Chr25g0286171 Lupinus albus
Lj1A836G33 Lonicera japonica
Lj3g0008187 Lotus japonicus
Lsat_1_v5_gn_5_128780 Lactuca sativa
Manes.12G158400 Manihot esculenta
Mapoly0049s0129 Marchantia polymorpha
MBI06_g45594_MAGBIO Magnolia biondii
MD03G1236200 Malus domestica
MD11G1257100 Malus domestica
Medtr2g078520 Medicago truncatula
MELO3C019391.2 Cucumis melo
Migut.M00767 Erythranthe guttata
Nitab4.5_0000332g0200 Nicotiana tabacum
Nitab4.5_0003033g0020 Nicotiana tabacum
Nn1g04277 Nelumbo nucifera
Oeu007447.1 Olea europaea
Oeu019294.1 Olea europaea
Oeu025350.3 Olea europaea
Os01g0753100 Oryza sativa ssp. japonica
Peaxi162Scf00000g00284 Petunia axillaris
PGR083G0548 Punica granatum
PGSC0003DMG400015372 Solanum tuberosum
Phvul.005G069200 Phaseolus vulgaris
Potri.001G373200 Populus trichocarpa
Pp3c14_1550 Physcomitrium patens
Prupe.4G173000 Prunus persica
Psat5g241360 Pisum sativum
PSO210G4318 Papaver somniferum
PSO832G3682 Papaver somniferum
QL08p023388 Quercus lobata
RcHm_v2.0_Chr5g0031931 Rosa chinensis
RcHm_v2.0_Chr5g0031981 Rosa chinensis
RcHm_v2.0_Chr5g0032001 Rosa chinensis
RcHm_v2.0_Chr5g0032041 Rosa chinensis
Rhsim06G0203600 Rhododendron simsii
Sabra16G0245600 Salix brachista
SalBow7G1016 Salvia bowleyana
Sc16g0007340 Simmondsia chinensis
Sed0014270 Sechium edule
SEGI_01885 Sequoiadendron giganteum
SEGI_19921 Sequoiadendron giganteum
SEGI_26852 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24221 Striga asiatica
SMO116G0423 Selaginella moellendorffii
SMO116G0426 Selaginella moellendorffii
Solyc12g014050.2 Solanum lycopersicum
Sopen12g005790 Solanum pennellii
Sp3g13290 Schrenkiella parvula
TAR627G0901 Trochodendron aralioides
THA.LOC104798757 Tarenaya hassleriana
THA.LOC104810454 Tarenaya hassleriana
Thecc.07G100100 Theobroma cacao
Thhalv10020985m.g Eutrema salsugineum
TPR.G22064 Trifolium pratense
TPR.G29650 Trifolium pratense
TPR.G40527 Trifolium pratense
TWI38G1662 Tripterygium wilfordii
unitig_52.g17400 Utricularia gibba
vmacro11900 Vaccinium macrocarpon
VMungo1080G1405 Vigna mungo
Zm00001eb152950 Zea mays

User provided reference genes

Program Settings