Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47790 Brassica napus
Aa31LG5G3610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2275 Anthoceros agrestis
Actinidia40084 Actinidia chinensis
Ah.13g066060 Amaranthus hybridus
AL307U10020 Arabidopsis lyrata
AL484U10020 Arabidopsis lyrata
AL8G16680 Arabidopsis lyrata
Aqoxy2G03568 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.562L79 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WBEP1R Arachis hypogaea
AT5G43600 Arabidopsis thaliana
ATR0665G589 Amborella trichopoda
Atru.BG.84.p Acer truncatum
Atru.chr4.2219 Acer truncatum
AUR62002250 Chenopodium quinoa
AUR62015461 Chenopodium quinoa
AUR62023832 Chenopodium quinoa
BcaB07g30566 Brassica carinata
BcaC06g31687 Brassica carinata
BcaC06g34641 Brassica carinata
BolC7t43148H Brassica oleracea
BraA06t27649Z Brassica rapa
C07p26210 Brassica napus
CAN.G1007.11 Capsicum annuum
CAN.G1181.27 Capsicum annuum
CAN.G1305.29 Capsicum annuum
CAN.G1469.11 Capsicum annuum
CAN.G220.27 Capsicum annuum
CAN.G651.12 Capsicum annuum
CANSAT78G2122 Cannabis sativa
CARHR006240 Cardamine hirsuta
Carub.0008s0503 Capsella rubella
Ca_09838_v3 Cicer arietinum L.
CBR_g40439 Chara braunii
CBR_g4812 Chara braunii
Cc03_g04910 Coffea canephora
CDE06G2174 Ceratophyllum demersum
CDE07G1054 Ceratophyllum demersum
Cfa008373 Carpinus fangiana
Cfa008375 Carpinus fangiana
Cfa025646 Carpinus fangiana
Ciclev10004873m.g Citrus clementina
Ciclev10004875m.g Citrus clementina
Ciclev10007151m.g Citrus clementina
CiPaw.01G190000 Carya illinoinensis
ClCG05G004570 Citrullus lanatus
COL.COLO4_15798 Corchorus olitorius
Cpa.g.sc58.52 Carica papaya
Cre06.g276700 Chlamydomonas reinhardtii
CsaV3_3G012550 Cucumis sativus L.
CSS0003291 Camellia sinensis var. sinensis
CSS0012294 Camellia sinensis var. sinensis
DCAR_027281 Daucus carota
Dinv29906 Davidia involucrata
Duzib151G0442 Durio zibethinus
Duzib212G0361 Durio zibethinus
ECA233G3252 Erigeron canadensis
EL10Ac3g05890 Beta vulgaris
Eucgr.H03154 Eucalyptus grandis
FAN12G3785 Fragaria x ananassa
FvH4_4g02810 Fragaria vesca
Glyma.10G184900 Glycine max
Glyma.20G205500 Glycine max
Gohir.A09G057600 Gossypium hirsutum
Gohir.D09G056800 Gossypium hirsutum
Gorai.006G070400 Gossypium raimondii
GSVIVG01018124001 Vitis vinifera
HanXRQChr12g0386131 Helianthus annuus
Haze_11306 Corylus avellana
Haze_11309 Corylus avellana
Hma1.2p1_1276F.1_g272180 Hydrangea macrophylla
Hma1.2p1_1276F.1_g272190 Hydrangea macrophylla
HPP92_018494 Vanilla planifolia
HPP92_018496 Vanilla planifolia
Hund11855 Selenicereus undatus
Lalb_Chr06g0169281 Lupinus albus
Lalb_Chr21g0312281 Lupinus albus
Lj5g0022725 Lotus japonicus
Lj6A657G48 Lonicera japonica
Lsat_1_v5_gn_5_72961 Lactuca sativa
Manes.03G168500 Manihot esculenta
Mapoly0068s0045 Marchantia polymorpha
MBI11_g34854_MAGBIO Magnolia biondii
MCO01G069 Micromonas commoda
MD13G1207900 Malus domestica
MD16G1209400 Malus domestica
Medtr1g075320 Medicago truncatula
MELO3C006466.2 Cucumis melo
Migut.N00242 Erythranthe guttata
MSTRG.24699 Avicennia marina
Nitab4.5_0000525g0250 Nicotiana tabacum
Nitab4.5_0001418g0050 Nicotiana tabacum
Nn1g02619 Nelumbo nucifera
Oeu002606.1 Olea europaea
Oeu032589.1 Olea europaea
Os12g0597500 Oryza sativa ssp. japonica
Peaxi162Scf00813g00223 Petunia axillaris
PGR004G1836 Punica granatum
PGSC0003DMG400015115 Solanum tuberosum
Phvul.007G125750 Phaseolus vulgaris
Potri.010G076100 Populus trichocarpa
Pp3c9_12590 Physcomitrium patens
PRCOL_00003767 Prasinoderma coloniale
Prupe.1G031400 Prunus persica
Psat6g125320 Pisum sativum
Psat6g125360 Pisum sativum
PSO210G3950 Papaver somniferum
QL06p015833 Quercus lobata
RcHm_v2.0_Chr4g0390621 Rosa chinensis
RcHm_v2.0_Chr4g0390681 Rosa chinensis
Rhsim04G0189900 Rhododendron simsii
Sabra08G0124400 Salix brachista
Sabra10G0032700 Salix brachista
SalBow3G1895 Salvia bowleyana
Sc19g0002030 Simmondsia chinensis
Sed0003134 Sechium edule
SEGI_06434 Sequoiadendron giganteum
SEGI_20828 Sequoiadendron giganteum
SEGI_33451 Sequoiadendron giganteum
SGA_v2.0_scaffold79G25631 Striga asiatica
SMO358G0475 Selaginella moellendorffii
Solyc09g083410.4 Solanum lycopersicum
Sopen09g032350 Solanum pennellii
Sp2g08410 Schrenkiella parvula
TAR365G0225 Trochodendron aralioides
THA.LOC104801094 Tarenaya hassleriana
Thecc.04G246600 Theobroma cacao
Thhalv10003195m.g Eutrema salsugineum
TPR.G27197 Trifolium pratense
TWI09G0474 Tripterygium wilfordii
unitig_46.g18501 Utricularia gibba
unitig_47.g30761 Utricularia gibba
unitig_47.g30762 Utricularia gibba
vmacro08417 Vaccinium macrocarpon
VMungo0720G3093 Vigna mungo
Zm00001eb030970 Zea mays

User provided reference genes

Program Settings