Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p10800 Brassica napus
A08p31820 Brassica napus
A09p61820 Brassica napus
Aa31LG1G340 Aethionema arabicum
Aa31LG2G8110 Aethionema arabicum
Actinidia22431 Actinidia chinensis
Ah.04g160370 Amaranthus hybridus
Ah.06g189510 Amaranthus hybridus
AL1G26770 Arabidopsis lyrata
Aqoxy3G04061 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FUL2U5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UBK9I9 Arachis hypogaea
AT1G14750 Arabidopsis thaliana
ATR0021G040 Amborella trichopoda
Atru.chr11.819 Acer truncatum
Atru.chr11.820 Acer truncatum
AUR62000804 Chenopodium quinoa
AUR62005164 Chenopodium quinoa
BcaB02g06546 Brassica carinata
BcaB03g13082 Brassica carinata
BcaC07g38760 Brassica carinata
BcaC07g41541 Brassica carinata
BolC5t30013H Brassica oleracea
BolC8t49318H Brassica oleracea
BolC8t52099H Brassica oleracea
BraA06t24258Z Brassica rapa
BraA08t35104Z Brassica rapa
BraA09t41550Z Brassica rapa
C05p12700 Brassica napus
C08p16910 Brassica napus
C08p45460 Brassica napus
CAN.G74.21 Capsicum annuum
CARHR015280 Cardamine hirsuta
Carub.0001s1454 Capsella rubella
Ca_13001_v3 Cicer arietinum L.
Ca_13003_v3 Cicer arietinum L.
CBR_g22377 Chara braunii
CBR_g9130 Chara braunii
Cc11_g06580 Coffea canephora
CDE05G2816 Ceratophyllum demersum
CDE11G1165 Ceratophyllum demersum
Cfa015048 Carpinus fangiana
Ciclev10017889m.g Citrus clementina
CiPaw.06G055200 Carya illinoinensis
ClCG07G005440 Citrullus lanatus
COL.COLO4_27610 Corchorus olitorius
COL.COLO4_27611 Corchorus olitorius
Cpa.g.sc2.165 Carica papaya
CsaV3_5G014510 Cucumis sativus L.
CSS0022543 Camellia sinensis var. sinensis
DCAR_023563 Daucus carota
Dinv26373 Davidia involucrata
Dinv26379 Davidia involucrata
Duzib251G0248 Durio zibethinus
ECA234G1246 Erigeron canadensis
EL10Ac4g09401 Beta vulgaris
Eucgr.B02694 Eucalyptus grandis
FAN07G0145 Fragaria x ananassa
FAN07G0664 Fragaria x ananassa
FAN12G1928 Fragaria x ananassa
FAN12G4059 Fragaria x ananassa
FAN12G4197 Fragaria x ananassa
FAN17G1112 Fragaria x ananassa
FAN22G0411 Fragaria x ananassa
FAN26G0724 Fragaria x ananassa
FAN28G0559 Fragaria x ananassa
FvH4_4g33270 Fragaria vesca
Glyma.02G086500 Glycine max
Glyma.07G172600 Glycine max
Gohir.A12G154700 Gossypium hirsutum
Gohir.D12G157900 Gossypium hirsutum
Gorai.008G170700 Gossypium raimondii
GSVIVG01011625001 Vitis vinifera
HanXRQChr16g0527251 Helianthus annuus
HanXRQChr17g0566001 Helianthus annuus
Haze_10846 Corylus avellana
Hma1.2p1_0234F.1_g098410 Hydrangea macrophylla
Hma1.2p1_1172F.1_g263560 Hydrangea macrophylla
Hma1.2p1_1786F.1_g302390 Hydrangea macrophylla
Hma1.2p1_1845F.1_g305150 Hydrangea macrophylla
Hma1.2p1_2790F.1_g328600 Hydrangea macrophylla
HPP92_002293 Vanilla planifolia
Lalb_Chr10g0095581 Lupinus albus
Lalb_Chr10g0095591 Lupinus albus
Lj1P737T43 Lonicera japonica
Lj2g0010004 Lotus japonicus
Lj6A734T81 Lonicera japonica
Lj8C221G12 Lonicera japonica
Lsat_1_v5_gn_4_23401 Lactuca sativa
Manes.17G085800 Manihot esculenta
MD13G1018000 Malus domestica
Medtr1g032850 Medicago truncatula
MELO3C016674.2 Cucumis melo
Migut.E00496 Erythranthe guttata
Nitab4.5_0003884g0090 Nicotiana tabacum
Nitab4.5_0007364g0010 Nicotiana tabacum
Nitab4.5_0012105g0040 Nicotiana tabacum
Nn4g24463 Nelumbo nucifera
Oeu006299.1 Olea europaea
Os03g0225200 Oryza sativa ssp. japonica
Peaxi162Scf00337g00625 Petunia axillaris
PGR004G2344 Punica granatum
PGSC0003DMG400029513 Solanum tuberosum
Phvul.003G016100 Phaseolus vulgaris
Potri.010G103800 Populus trichocarpa
Prupe.1G335600 Prunus persica
Psat6g051160 Pisum sativum
PSO478G0479 Papaver somniferum
PSO782G1915 Papaver somniferum
PSO782G2706 Papaver somniferum
QL03p038226 Quercus lobata
QL10p001857 Quercus lobata
RcHm_v2.0_Chr4g0442421 Rosa chinensis
SalBow2G2494 Salvia bowleyana
Sc16g0008510 Simmondsia chinensis
Sed0025695 Sechium edule
Sed0028047 Sechium edule
SEGI_10740 Sequoiadendron giganteum
SGA_v2.0_scaffold23G10169 Striga asiatica
SHI04346 Sapria himalayana
Solyc04g008070.3 Solanum lycopersicum
Sopen04g003220 Solanum pennellii
Sp1g13190 Schrenkiella parvula
Sp4g07290 Schrenkiella parvula
Sp6g13180 Schrenkiella parvula
TAR629G0065 Trochodendron aralioides
THA.LOC104805940 Tarenaya hassleriana
Thecc.02G307500 Theobroma cacao
Thhalv10009486m.g Eutrema salsugineum
TPR.G6435 Trifolium pratense
TWI74G1321 Tripterygium wilfordii
unitig_27.g25164 Utricularia gibba
unitig_29.g31882 Utricularia gibba
VMungo1215G3061 Vigna mungo
Zm00001eb009260 Zea mays
Zm00001eb009270 Zea mays
Zm00001eb399650 Zea mays

User provided reference genes

Program Settings