Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16300 Brassica napus
A10p07980 Brassica napus
Aa31LG3G14030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1706 Anthoceros agrestis
Actinidia00189 Actinidia chinensis
Actinidia39015 Actinidia chinensis
AL6G41240 Arabidopsis lyrata
Aqoxy6G00141 Aquilegia oxysepala
Aqoxy7G03683 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0L29ML Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E4SRBI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I6AGPX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYP07C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UJ0XJV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VA1YNF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XX0GIY Arachis hypogaea
AT4G06634 Arabidopsis thaliana
ATR0071G005 Amborella trichopoda
ATR0071G030 Amborella trichopoda
Atru.chr6.733 Acer truncatum
AUR62041111 Chenopodium quinoa
BcaB08g35467 Brassica carinata
BcaC01g06075 Brassica carinata
BcaC01g06099 Brassica carinata
BcaC04g20728 Brassica carinata
BolC3t14307H Brassica oleracea
BolC9t56882H Brassica oleracea
BraA03t10921Z Brassica rapa
BraSC35t46002Z Brassica rapa
C03p19190 Brassica napus
C09p39820 Brassica napus
CAN.G968.1 Capsicum annuum
CAN.G982.21 Capsicum annuum
CANSAT54G1323 Cannabis sativa
CARHR260070 Cardamine hirsuta
Carub.0006s2631 Capsella rubella
Ca_00052_v3 Cicer arietinum L.
CBR_g52462 Chara braunii
Cc02_g22940 Coffea canephora
CDE02G2650 Ceratophyllum demersum
CDE08G1140 Ceratophyllum demersum
Ciclev10001534m.g Citrus clementina
Ciclev10003783m.g Citrus clementina
Ciclev10003892m.g Citrus clementina
CiPaw.05G051100 Carya illinoinensis
CiPaw.06G143700 Carya illinoinensis
ClCG11G013400 Citrullus lanatus
COL.COLO4_17761 Corchorus olitorius
Cpa.g.sc161.1 Carica papaya
CsaV3_5G029920 Cucumis sativus L.
CSS0013900 Camellia sinensis var. sinensis
CSS0016011 Camellia sinensis var. sinensis
DCAR_025351 Daucus carota
Dinv01847 Davidia involucrata
Duzib248G0552 Durio zibethinus
ECA233G1887 Erigeron canadensis
EL10Ac2g02705 Beta vulgaris
Eucgr.G00356 Eucalyptus grandis
FAN04G2588 Fragaria x ananassa
FAN08G2879 Fragaria x ananassa
FAN13G0305 Fragaria x ananassa
FAN18G2475 Fragaria x ananassa
FvH4_5g28700 Fragaria vesca
Glyma.05G167900 Glycine max
Glyma.07G248451 Glycine max
Glyma.08G126300 Glycine max
Gohir.A01G182000 Gossypium hirsutum
Gohir.D01G173100 Gossypium hirsutum
Gorai.002G214700 Gossypium raimondii
GSVIVG01023286001 Vitis vinifera
HanXRQChr04g0103661 Helianthus annuus
HanXRQChr08g0209021 Helianthus annuus
Haze_01820 Corylus avellana
Hma1.2p1_1108F.1_g257860 Hydrangea macrophylla
HPP92_009272 Vanilla planifolia
Hund12945 Selenicereus undatus
Lalb_Chr07g0185851 Lupinus albus
Lalb_Chr13g0295611 Lupinus albus
Lj4g0022432 Lotus japonicus
Lj9A301T38 Lonicera japonica
Lsat_1_v5_gn_4_6600 Lactuca sativa
Lsat_1_v5_gn_8_160061 Lactuca sativa
Manes.10G120600 Manihot esculenta
Mapoly0095s0037 Marchantia polymorpha
MD08G1239600 Malus domestica
MD15G1431100 Malus domestica
MELO3C011837.2 Cucumis melo
Migut.B00804 Erythranthe guttata
MSTRG.16504 Avicennia marina
MSTRG.5117 Avicennia marina
Nitab4.5_0000548g0200 Nicotiana tabacum
Nitab4.5_0009812g0010 Nicotiana tabacum
Nn5g27588 Nelumbo nucifera
Oeu023416.1 Olea europaea
Oeu036675.1 Olea europaea
Os02g0551900 Oryza sativa ssp. japonica
Os05g0106000 Oryza sativa ssp. japonica
Peaxi162Scf00003g04037 Petunia axillaris
Peaxi162Scf03254g00012 Petunia axillaris
PGR042G1418 Punica granatum
PGSC0003DMG400009082 Solanum tuberosum
Phvul.002G248200 Phaseolus vulgaris
Potri.003G010400 Populus trichocarpa
Potri.004G221700 Populus trichocarpa
Pp3c7_7980 Physcomitrium patens
Prupe.1G576100 Prunus persica
Psat1g221920 Pisum sativum
PSO017G2626 Papaver somniferum
PSO063G2254 Papaver somniferum
QL02p099934 Quercus lobata
RcHm_v2.0_Chr7g0220861 Rosa chinensis
Rhsim11G0125900 Rhododendron simsii
Sabra01G0167800 Salix brachista
Sabra03G0005300 Salix brachista
Sc07g0004970 Simmondsia chinensis
Sed0022153 Sechium edule
Sed0026787 Sechium edule
SEGI_13518 Sequoiadendron giganteum
SGA_v2.0_scaffold338G49234 Striga asiatica
SGA_v2.0_scaffold42G15921 Striga asiatica
SMO347G0081 Selaginella moellendorffii
Solyc03g083310.4 Solanum lycopersicum
Sopen03g023060 Solanum pennellii
Sp6g13330 Schrenkiella parvula
TAR381G0956 Trochodendron aralioides
TAR628G0519 Trochodendron aralioides
THA.LOC104801420 Tarenaya hassleriana
Thecc.02G025800 Theobroma cacao
Thhalv10028723m.g Eutrema salsugineum
TPR.G2110 Trifolium pratense
TWI23G0375 Tripterygium wilfordii
TWI59G0781 Tripterygium wilfordii
unitig_699.g19853 Utricularia gibba
unitig_747.g21262 Utricularia gibba
vmacro01730 Vaccinium macrocarpon
VMungo0251G3735 Vigna mungo
Zm00001eb181970 Zea mays
Zm00001eb243510 Zea mays
Zm00001eb267130 Zea mays

User provided reference genes

Program Settings