Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p23410 Brassica napus
Actinidia11289 Actinidia chinensis
Ah.07g202470 Amaranthus hybridus
AL4G25600 Arabidopsis lyrata
Aqoxy5G00007 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9I2FR5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYJ1G5 Arachis hypogaea
AT2G30700 Arabidopsis thaliana
ATR0743G178 Amborella trichopoda
Atru.chr4.1341 Acer truncatum
AUR62002364 Chenopodium quinoa
AUR62023821 Chenopodium quinoa
BcaB01g04084 Brassica carinata
BolC3t14401H Brassica oleracea
BolC4t27479H Brassica oleracea
BraA03t10991Z Brassica rapa
C03p20260 Brassica napus
C04p59710 Brassica napus
CAN.G13.16 Capsicum annuum
CAN.G1426.2 Capsicum annuum
CANSAT54G1501 Cannabis sativa
CARHR124200 Cardamine hirsuta
Carub.0004s1188 Capsella rubella
Ca_20459_v3 Cicer arietinum L.
Cc03_g12630 Coffea canephora
CDE02G2947 Ceratophyllum demersum
CDE07G1023 Ceratophyllum demersum
CDE07G1029 Ceratophyllum demersum
Ciclev10020018m.g Citrus clementina
CiPaw.01G173500 Carya illinoinensis
CiPaw.02G103300 Carya illinoinensis
ClCG07G011640 Citrullus lanatus
COL.COLO4_04541 Corchorus olitorius
Cpa.g.sc54.4 Carica papaya
Cpa.g.sc9.330 Carica papaya
CsaV3_4G002570 Cucumis sativus L.
CSS0007752 Camellia sinensis var. sinensis
CSS0030013 Camellia sinensis var. sinensis
DCAR_029912 Daucus carota
Dinv44165 Davidia involucrata
Duzib151G0432 Durio zibethinus
Duzib212G0638 Durio zibethinus
Duzib268G0056 Durio zibethinus
ECA238G4032 Erigeron canadensis
EL10Ac3g06028 Beta vulgaris
Eucgr.A00037 Eucalyptus grandis
FAN07G0323 Fragaria x ananassa
FAN12G0586 Fragaria x ananassa
FAN12G1872 Fragaria x ananassa
FAN12G3406 Fragaria x ananassa
FAN17G1654 Fragaria x ananassa
FAN22G1910 Fragaria x ananassa
FvH4_4g10670 Fragaria vesca
Glyma.09G227300 Glycine max
Glyma.12G009500 Glycine max
Gohir.A09G212600 Gossypium hirsutum
Gohir.D09G206100 Gossypium hirsutum
Gorai.006G230000 Gossypium raimondii
GSVIVG01038092001 Vitis vinifera
HanXRQChr09g0257931 Helianthus annuus
Haze_01418 Corylus avellana
Haze_01420 Corylus avellana
HPP92_023717 Vanilla planifolia
Hund03186 Selenicereus undatus
Lalb_Chr01g0000471 Lupinus albus
Lalb_Chr03g0024091 Lupinus albus
Lj3A150T35 Lonicera japonica
Lj3g0002796 Lotus japonicus
Lsat_1_v5_gn_2_35481 Lactuca sativa
Manes.11G127200 Manihot esculenta
Mapoly0002s0205 Marchantia polymorpha
MBI11_g23944_MAGBIO Magnolia biondii
MD03G1229900 Malus domestica
MD11G1250400 Malus domestica
Medtr0221s0020 Medicago truncatula
MELO3C017786.2 Cucumis melo
Migut.G01289 Erythranthe guttata
MSTRG.22017 Avicennia marina
MSTRG.24570 Avicennia marina
Nitab4.5_0000225g0090 Nicotiana tabacum
Nitab4.5_0002921g0020 Nicotiana tabacum
Nitab4.5_0005382g0050 Nicotiana tabacum
Nitab4.5_0007583g0030 Nicotiana tabacum
Nn1g09726 Nelumbo nucifera
Oeu020488.2 Olea europaea
Oeu022689.1 Olea europaea
Oeu035190.1 Olea europaea
Oeu056125.1 Olea europaea
Os10g0534100 Oryza sativa ssp. japonica
Peaxi162Scf00126g00811 Petunia axillaris
PGR083G1614 Punica granatum
Phvul.011G011600 Phaseolus vulgaris
Potri.007G133733 Populus trichocarpa
Potri.007G133800 Populus trichocarpa
Potri.017G018000 Populus trichocarpa
Pp3c13_1140 Physcomitrium patens
Pp3c5_15330 Physcomitrium patens
Prupe.1G201300 Prunus persica
Prupe.4G179400 Prunus persica
Psat7g157040 Pisum sativum
PSO210G2059 Papaver somniferum
PSO832G2491 Papaver somniferum
QL10p052128 Quercus lobata
RcHm_v2.0_Chr4g0406321 Rosa chinensis
Rhsim02G0082900 Rhododendron simsii
Sabra07G0108600 Salix brachista
Sabra07G0120900 Salix brachista
Sabra17G0002400 Salix brachista
Sabra17G0002500 Salix brachista
Sabra17G0002800 Salix brachista
Sabra17G0003400 Salix brachista
Sabra17G0004000 Salix brachista
Sabra17G0004500 Salix brachista
Sabra17G0014200 Salix brachista
SalBow2G3287 Salvia bowleyana
Sc25g0002640 Simmondsia chinensis
Sed0013668 Sechium edule
Sed0021507 Sechium edule
SEGI_08422 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06177 Striga asiatica
SGA_v2.0_scaffold283G46993 Striga asiatica
SHI32811 Sapria himalayana
SMO115G0338 Selaginella moellendorffii
Solyc08g013880.4 Solanum lycopersicum
Solyc11g045330.2 Solanum lycopersicum
Sopen08g004750 Solanum pennellii
Sopen11g020790 Solanum pennellii
Sp4g13220 Schrenkiella parvula
TAR362G0218 Trochodendron aralioides
TAR633G1416 Trochodendron aralioides
THA.LOC104800809 Tarenaya hassleriana
THA.LOC104815835 Tarenaya hassleriana
Thecc.04G171600 Theobroma cacao
Thhalv10016766m.g Eutrema salsugineum
TPR.G30184 Trifolium pratense
TWI31G1468 Tripterygium wilfordii
unitig_21.g20574 Utricularia gibba
VMungo1127G0778 Vigna mungo
Zm00001eb021900 Zea mays

User provided reference genes

Program Settings