Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00180 Brassica napus
A05p16640 Brassica napus
Aa31LG1G23250 Aethionema arabicum
Aa31sc411G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1800 Anthoceros agrestis
Ah.11g042510 Amaranthus hybridus
Ah.12g059020 Amaranthus hybridus
AL6G10420 Arabidopsis lyrata
Aqoxy2G00779 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.168PWC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XPQW08 Arachis hypogaea
AT4G00020 Arabidopsis thaliana
AT5G01630 Arabidopsis thaliana
ATR0594G137 Amborella trichopoda
Atru.chr8.2328 Acer truncatum
AUR62030526 Chenopodium quinoa
AUR62030766 Chenopodium quinoa
BcaB01g06109 Brassica carinata
BcaB01g06242 Brassica carinata
BcaB04g17743 Brassica carinata
BcaB06g27242 Brassica carinata
BcaC08g44292 Brassica carinata
BolC3t12595H Brassica oleracea
BolC6t36909H Brassica oleracea
BraA03t09408Z Brassica rapa
BraA05t20569Z Brassica rapa
C03p00330 Brassica napus
C06p17140 Brassica napus
CAN.G989.4 Capsicum annuum
CANSAT35G0044 Cannabis sativa
CARHR211980 Cardamine hirsuta
Carub.0006s0020 Capsella rubella
Ca_16367_v3 Cicer arietinum L.
CBR_g19769 Chara braunii
Cc06_g00810 Coffea canephora
CDE04G0037 Ceratophyllum demersum
CDE04G0109 Ceratophyllum demersum
Ciclev10013403m.g Citrus clementina
CiPaw.09G214500 Carya illinoinensis
CiPaw.09G214600 Carya illinoinensis
ClCG10G022430 Citrullus lanatus
COL.COLO4_14461 Corchorus olitorius
Cpa.g.sc5.230 Carica papaya
Cre13.g566900 Chlamydomonas reinhardtii
CsaV3_3G033440 Cucumis sativus L.
CSS0001431 Camellia sinensis var. sinensis
CSS0019886 Camellia sinensis var. sinensis
CSS0042379 Camellia sinensis var. sinensis
DCAR_009651 Daucus carota
DCAR_028424 Daucus carota
Dinv35394 Davidia involucrata
Duzib093G0745 Durio zibethinus
ECA234G3016 Erigeron canadensis
EL10Ac5g12491 Beta vulgaris
Eucgr.K02953 Eucalyptus grandis
FAN19G0240 Fragaria x ananassa
FAN23G3111 Fragaria x ananassa
FAN26G2490 Fragaria x ananassa
FAN28G2142 Fragaria x ananassa
FvH4_1g25820 Fragaria vesca
Glyma.13G010700 Glycine max
Gohir.A04G095400 Gossypium hirsutum
Gohir.D04G135300 Gossypium hirsutum
Gorai.012G119100 Gossypium raimondii
GSVIVG01030280001 Vitis vinifera
HanXRQChr15g0486851 Helianthus annuus
Haze_21075 Corylus avellana
Haze_21131 Corylus avellana
Haze_21134 Corylus avellana
HPP92_013842 Vanilla planifolia
HPP92_013858 Vanilla planifolia
Hund25531 Selenicereus undatus
Lalb_Chr08g0236481 Lupinus albus
Lalb_Chr22g0360891 Lupinus albus
Lj2C68T2 Lonicera japonica
Lj6g0012785 Lotus japonicus
Lsat_1_v5_gn_5_149520 Lactuca sativa
Manes.09G111200 Manihot esculenta
Mapoly0045s0096 Marchantia polymorpha
MBI03_g13048_MAGBIO Magnolia biondii
MBI03_g13049_MAGBIO Magnolia biondii
MCO02G178 Micromonas commoda
MD01G1008700 Malus domestica
Medtr0191s0030 Medicago truncatula
Medtr3g083250 Medicago truncatula
Medtr6g033115 Medicago truncatula
Medtr6g036580 Medicago truncatula
MELO3C009135.2 Cucumis melo
Migut.J00101 Erythranthe guttata
MSTRG.18977 Avicennia marina
Nitab4.5_0001246g0050 Nicotiana tabacum
Nitab4.5_0006212g0010 Nicotiana tabacum
Nitab4.5_0010437g0010 Nicotiana tabacum
Nitab4.5_0021252g0010 Nicotiana tabacum
Nn2g11003 Nelumbo nucifera
Oeu026978.1 Olea europaea
Oeu027330.4 Olea europaea
Os01g0164800 Oryza sativa ssp. japonica
Peaxi162Scf00744g00354 Petunia axillaris
Phvul.006G005800 Phaseolus vulgaris
Phvul.L001612 Phaseolus vulgaris
Potri.014G189600 Populus trichocarpa
Prupe.4G287200 Prunus persica
Psat5g101280 Pisum sativum
PSO339G1571 Papaver somniferum
PSO801G0135 Papaver somniferum
QL07p034075 Quercus lobata
RcHm_v2.0_Chr3g0484931 Rosa chinensis
Rhsim05G0225400 Rhododendron simsii
Sabra06G0080700 Salix brachista
Sabra14G0144800 Salix brachista
SalBow5G0042 Salvia bowleyana
SalBow5G1296 Salvia bowleyana
Sc07g0001460 Simmondsia chinensis
Sed0013669 Sechium edule
SEGI_16196 Sequoiadendron giganteum
SEGI_19397 Sequoiadendron giganteum
SEGI_27109 Sequoiadendron giganteum
SEGI_30642 Sequoiadendron giganteum
SGA_v2.0_scaffold85G26687 Striga asiatica
SHI12869 Sapria himalayana
SHI12870 Sapria himalayana
Solyc02g050200.2 Solanum lycopersicum
Solyc02g050210.2 Solanum lycopersicum
Sopen02g008440 Solanum pennellii
Sp6g40890 Schrenkiella parvula
Sp7g05130 Schrenkiella parvula
TAR633G1737 Trochodendron aralioides
THA.LOC104798645 Tarenaya hassleriana
THA.LOC104816179 Tarenaya hassleriana
Thecc.05G007600 Theobroma cacao
Thhalv10012491m.g Eutrema salsugineum
Thhalv10027627m.g Eutrema salsugineum
TPR.G18982 Trifolium pratense
TPR.G19329 Trifolium pratense
TWI74G0298 Tripterygium wilfordii
unitig_21.g20911 Utricularia gibba
vmacro04273 Vaccinium macrocarpon
VMungo0540G1710 Vigna mungo
Zm00001eb419130 Zea mays

User provided reference genes

Program Settings