Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p13620 Brassica napus
A09p15530 Brassica napus
A09p28450 Brassica napus
Aa31sc221G90 Aethionema arabicum
Actinidia04156 Actinidia chinensis
Actinidia22234 Actinidia chinensis
Actinidia27276 Actinidia chinensis
Ah.08g216960 Amaranthus hybridus
Ah.15g095260 Amaranthus hybridus
AL2G11840 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.GG3QCC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1T8WI Arachis hypogaea
AT1G63310 Arabidopsis thaliana
ATR0579G028 Amborella trichopoda
Atru.chr9.1827 Acer truncatum
AUR62001462 Chenopodium quinoa
AUR62009906 Chenopodium quinoa
BcaB01g01514 Brassica carinata
BcaB07g31399 Brassica carinata
BcaB07g31580 Brassica carinata
BcaC04g22484 Brassica carinata
BcaC04g22699 Brassica carinata
BolC9t54538H Brassica oleracea
BolC9t54780H Brassica oleracea
BolC9t56436H Brassica oleracea
BraA09t37015Z Brassica rapa
BraA09t37193Z Brassica rapa
BraA09t38410Z Brassica rapa
C09p16280 Brassica napus
C09p18780 Brassica napus
C09p36020 Brassica napus
CAN.G129.24 Capsicum annuum
CANSAT21G1898 Cannabis sativa
CARHR047990 Cardamine hirsuta
Carub.0002s0149 Capsella rubella
Ca_00460_v3 Cicer arietinum L.
Cc05_g01210 Coffea canephora
CDE09G0230 Ceratophyllum demersum
Cfa011882 Carpinus fangiana
Ciclev10022546m.g Citrus clementina
CiPaw.11G108200 Carya illinoinensis
CiPaw.12G074100 Carya illinoinensis
ClCG07G008170 Citrullus lanatus
COL.COLO4_10851 Corchorus olitorius
Cpa.g.sc62.61 Carica papaya
CsaV3_4G005910 Cucumis sativus L.
CSS0006649 Camellia sinensis var. sinensis
CSS0030685 Camellia sinensis var. sinensis
DCAR_023826 Daucus carota
Dinv08689 Davidia involucrata
Dinv11470 Davidia involucrata
Duzib068G0481 Durio zibethinus
Duzib084G1128 Durio zibethinus
Duzib205G0686 Durio zibethinus
ECA233G5147 Erigeron canadensis
Eucgr.E01097 Eucalyptus grandis
FAN04G3153 Fragaria x ananassa
FAN08G3085 Fragaria x ananassa
FAN13G1264 Fragaria x ananassa
FAN18G0874 Fragaria x ananassa
FvH4_5g10310 Fragaria vesca
Glyma.01G146800 Glycine max
Glyma.02G159700 Glycine max
Glyma.10G112800 Glycine max
Glyma.13G227300 Glycine max
Glyma.15G085000 Glycine max
Gohir.A02G094800 Gossypium hirsutum
Gohir.A12G243100 Gossypium hirsutum
Gohir.D03G088700 Gossypium hirsutum
Gohir.D12G244100 Gossypium hirsutum
Gorai.003G073000 Gossypium raimondii
Gorai.008G261600 Gossypium raimondii
HanXRQChr05g0144281 Helianthus annuus
Haze_09222 Corylus avellana
HPP92_007373 Vanilla planifolia
Lalb_Chr19g0129261 Lupinus albus
Lj2P149T61 Lonicera japonica
Lj6g0026446 Lotus japonicus
Lsat_1_v5_gn_4_127821 Lactuca sativa
Lsat_1_v5_gn_8_120821 Lactuca sativa
Manes.04G133300 Manihot esculenta
MBI12_g05895_MAGBIO Magnolia biondii
MD00G1118700 Malus domestica
MD06G1125100 Malus domestica
Medtr2g016680 Medicago truncatula
MELO3C016357.2 Cucumis melo
Migut.E00712 Erythranthe guttata
MSTRG.13689 Avicennia marina
Nitab4.5_0000960g0060 Nicotiana tabacum
Nitab4.5_0008499g0040 Nicotiana tabacum
Nitab4.5_0018124g0020 Nicotiana tabacum
Nn1g02007 Nelumbo nucifera
Nn3g18754 Nelumbo nucifera
Oeu011890.1 Olea europaea
Oeu026757.1 Olea europaea
Os04g0105200 Oryza sativa ssp. japonica
Peaxi162Scf00498g00079 Petunia axillaris
PGR031G1780 Punica granatum
PGR042G3248 Punica granatum
PGSC0003DMG400037636 Solanum tuberosum
PGSC0003DMG400044996 Solanum tuberosum
Phvul.006G173850 Phaseolus vulgaris
Phvul.007G247100 Phaseolus vulgaris
Potri.001G452900 Populus trichocarpa
Potri.011G149100 Populus trichocarpa
Prupe.5G135700 Prunus persica
Psat1g195600 Pisum sativum
PSO675G0589 Papaver somniferum
QL12p003217 Quercus lobata
RcHm_v2.0_Chr7g0187911 Rosa chinensis
Rhsim02G0255200 Rhododendron simsii
Sabra11G0134200 Salix brachista
Sabra16G0306000 Salix brachista
SalBow1G3976 Salvia bowleyana
SalBow5G4925 Salvia bowleyana
Sc12g0010690 Simmondsia chinensis
Sed0023501 Sechium edule
SEGI_10606 Sequoiadendron giganteum
SEGI_39402 Sequoiadendron giganteum
SGA_v2.0_scaffold71G23936 Striga asiatica
SGA_v2.0_scaffold99G29499 Striga asiatica
Solyc01g066860.3 Solanum lycopersicum
Solyc12g099590.1 Solanum lycopersicum
Sopen01g028460 Solanum pennellii
Sopen12g034260 Solanum pennellii
Sp2g01210 Schrenkiella parvula
Sp6g06720 Schrenkiella parvula
TAR375G0214 Trochodendron aralioides
THA.LOC104798383 Tarenaya hassleriana
THA.LOC104798386 Tarenaya hassleriana
THA.LOC104809289 Tarenaya hassleriana
Thecc.03G215000 Theobroma cacao
Thhalv10023730m.g Eutrema salsugineum
Thhalv10029291m.g Eutrema salsugineum
TPR.G4515 Trifolium pratense
TWI15G0432 Tripterygium wilfordii
TWI81G0214 Tripterygium wilfordii
unitig_62.g23264 Utricularia gibba
VMungo0540G0063 Vigna mungo
VMungo0720G3070 Vigna mungo
Zm00001eb089560 Zea mays
Zm00001eb418860 Zea mays

User provided reference genes

Program Settings