Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p56290 Brassica napus
A10p14880 Brassica napus
Aa31LG3G13320 Aethionema arabicum
Aa31LG3G230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.140 Anthoceros agrestis
Actinidia17318 Actinidia chinensis
Ah.09g229880 Amaranthus hybridus
Ah.14g083850 Amaranthus hybridus
AL7G27190 Arabidopsis lyrata
AL8G33410 Arabidopsis lyrata
Aqoxy7G03076 Aquilegia oxysepala
Aqoxy7G03078 Aquilegia oxysepala
Aqoxy7G03080 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0AS7E9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5J4LWM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8SC2X9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RX88G0 Arachis hypogaea
AT4G25840 Arabidopsis thaliana
AT5G57440 Arabidopsis thaliana
ATR0580G358 Amborella trichopoda
ATR1149G046 Amborella trichopoda
Atru.chr7.624 Acer truncatum
AUR62002388 Chenopodium quinoa
AUR62023800 Chenopodium quinoa
BcaB08g36099 Brassica carinata
BcaC04g19967 Brassica carinata
BcaC06g32782 Brassica carinata
BcaC08g43394 Brassica carinata
BolC6t35849H Brassica oleracea
BolC7t45942H Brassica oleracea
BolC9t57781H Brassica oleracea
BraA03t14700Z Brassica rapa
BraA10t43567Z Brassica rapa
C06p07610 Brassica napus
C07p54540 Brassica napus
C09p49300 Brassica napus
CAN.G2214.1 Capsicum annuum
CAN.G351.23 Capsicum annuum
CANSAT11G2247 Cannabis sativa
CARHR233300 Cardamine hirsuta
CARHR271230 Cardamine hirsuta
Carub.0007s1511 Capsella rubella
Carub.0008s1795 Capsella rubella
Ca_21225_v3 Cicer arietinum L.
Cc06_g13240 Coffea canephora
CDE04G2961 Ceratophyllum demersum
Cfa013504 Carpinus fangiana
Ciclev10009343m.g Citrus clementina
CiPaw.08G036300 Carya illinoinensis
ClCG06G013340 Citrullus lanatus
COL.COLO4_37698 Corchorus olitorius
Cpa.g.sc233.12 Carica papaya
Cre09.g401330 Chlamydomonas reinhardtii
CsaV3_1G031600 Cucumis sativus L.
CSS0019633 Camellia sinensis var. sinensis
DCAR_014698 Daucus carota
Dinv41247 Davidia involucrata
Dinv42722 Davidia involucrata
Dinv43379 Davidia involucrata
Duzib168G0313 Durio zibethinus
ECA236G3152 Erigeron canadensis
EL10Ac8g18284 Beta vulgaris
Eucgr.C02309 Eucalyptus grandis
Eucgr.C02310 Eucalyptus grandis
Eucgr.C02313 Eucalyptus grandis
FAN07G1551 Fragaria x ananassa
FAN12G1428 Fragaria x ananassa
FAN17G0257 Fragaria x ananassa
FAN22G1272 Fragaria x ananassa
FvH4_4g08210 Fragaria vesca
Glyma.13G096400 Glycine max
Gohir.A05G004700 Gossypium hirsutum
Gohir.D05G005600 Gossypium hirsutum
Gorai.009G005400 Gossypium raimondii
GSVIVG01029217001 Vitis vinifera
HanXRQChr05g0143001 Helianthus annuus
Haze_22096 Corylus avellana
Hma1.2p1_1025F.1_g249290 Hydrangea macrophylla
HPP92_021946 Vanilla planifolia
Hund26348 Selenicereus undatus
Lalb_Chr12g0199411 Lupinus albus
Lalb_Chr13g0300231 Lupinus albus
Lj4g0006839 Lotus japonicus
Lj9A684T48 Lonicera japonica
Lsat_1_v5_gn_8_67640 Lactuca sativa
Manes.14G153800 Manihot esculenta
Mapoly0050s0123 Marchantia polymorpha
MBI16_g39832_MAGBIO Magnolia biondii
MD13G1253800 Malus domestica
Medtr4g128090 Medicago truncatula
MELO3C017462.2 Cucumis melo
Migut.J01480 Erythranthe guttata
Migut.J01481 Erythranthe guttata
MSTRG.6215 Avicennia marina
Nitab4.5_0000455g0030 Nicotiana tabacum
Nitab4.5_0000730g0110 Nicotiana tabacum
Nitab4.5_0004134g0020 Nicotiana tabacum
Nn2g12777 Nelumbo nucifera
Oeu042167.1 Olea europaea
Os08g0243600 Oryza sativa ssp. japonica
Peaxi162Scf00231g00616 Petunia axillaris
PGR102G1486 Punica granatum
PGSC0003DMG400024453 Solanum tuberosum
Phvul.003G145700 Phaseolus vulgaris
Phvul.003G145800 Phaseolus vulgaris
Potri.018G092500 Populus trichocarpa
Pp3c21_16490 Physcomitrium patens
Prupe.1G086000 Prunus persica
Psat5g065160 Pisum sativum
PSO017G4075 Papaver somniferum
PSO063G3992 Papaver somniferum
QL02p097765 Quercus lobata
RcHm_v2.0_Chr4g0402461 Rosa chinensis
RcHm_v2.0_Chr6g0266651 Rosa chinensis
RcHm_v2.0_Chr6g0273661 Rosa chinensis
Rhsim03G0264400 Rhododendron simsii
Sabra06G0129700 Salix brachista
Sabra18G0079700 Salix brachista
SalBow6G3880 Salvia bowleyana
Sc14g0001270 Simmondsia chinensis
Sed0009942 Sechium edule
SEGI_10124 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22449 Striga asiatica
SHI49588 Sapria himalayana
SMO115G0322 Selaginella moellendorffii
Solyc10g054280.2 Solanum lycopersicum
Sopen10g024180 Solanum pennellii
Sp6g19150 Schrenkiella parvula
Sp7g23870 Schrenkiella parvula
TAR625G0405 Trochodendron aralioides
THA.LOC104811788 Tarenaya hassleriana
Thecc.09G177800 Theobroma cacao
Thhalv10014532m.g Eutrema salsugineum
Thhalv10025858m.g Eutrema salsugineum
TPR.G5369 Trifolium pratense
TPR.G5384 Trifolium pratense
TWI32G0852 Tripterygium wilfordii
vmacro06014 Vaccinium macrocarpon
VMungo1215G0755 Vigna mungo
VMungo1215G3132 Vigna mungo
Zm00001eb412460 Zea mays
Zm00001eb414640 Zea mays

User provided reference genes

Program Settings